RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 IGFLR1Q9H665 355 aa12.63□□□□□ -0.39
CACNB3-214ENST00000550168 NLE1Q9NVX2 485 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-214ENST00000550168 GRID1Q9ULK0 1009 aa12.63□□□□□ -0.39
CACNB3-214ENST00000550168 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
CACNB3-214ENST00000550168 MYO18AQ92614 2054 aaKnown RBP12.63□□□□□ -0.39
CACNB3-214ENST00000550168 TRIOO75962 3097 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 H7C0S8 307 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 DCXO43602 365 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 PRLP01236 227 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 APOA4P06727 396 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 PYGBP11216 843 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 POU3F3P20264 500 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 CRABP2P29373 138 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 TYK2P29597 1187 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 PPARGP37231 505 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 LEPRP48357 1165 aaKnown RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 KPNA2P52292 529 aaKnown RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 ZNF140P52738 457 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 POLR2LP62875 67 aaKnown RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 POU4F1Q01851 419 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 FCHO2Q0JRZ9 810 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 IHHQ14623 411 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 PDK4Q16654 411 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 QPCTQ16769 361 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 MYLK3Q32MK0 819 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 ZNF470Q6ECI4 717 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 MTSS1LQ765P7 747 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 ADIPOR2Q86V24 386 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 ZC3HC1Q86WB0 502 aaKnown RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 SPATS2Q86XZ4 545 aaKnown RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 MFSD6LQ8IWD5 586 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 YAF2Q8IY57 180 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 GRAMD1AQ96CP6 724 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 VPS39Q96JC1 886 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 SERAC1Q96JX3 654 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 INTS10Q9NVR2 710 aaKnown RBP12.62□□□□□ -0.39
CACNB3-214ENST00000550168 FBXO5Q9UKT4 447 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 CLEC4EQ9ULY5 219 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 PHTF1Q9UMS5 762 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 ERVW-1Q9UQF0 538 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 PKP3Q9Y446 797 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 PCDHGC4Q9Y5F7 938 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
CACNB3-214ENST00000550168 TRAFD1O14545 582 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 NDUFAB1O14561 156 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 SPAG7O75391 227 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 ECI2O75521 394 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 MT-CO1P00395 513 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 DLDP09622 509 aaKnown RBP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 ARNTP27540 789 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 RPA3P35244 121 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 HMGCLP35914 325 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 SLC12A2P55011 1212 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 BMPR2Q13873 1038 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 IER5LQ5T953 404 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 USP45Q70EL2 814 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 CILP2Q8IUL8 1156 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 SUGP1Q8IWZ8 645 aaKnown RBP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 ETFBKMTQ8IXQ9 262 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 UNC5BQ8IZJ1 945 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 PAF1Q8N7H5 531 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 OR6P1Q8NGX9 317 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 BCAS4Q8TDM0 211 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 TCP10LQ8TDR4 215 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 UCMAQ8WVF2 138 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 SREK1Q8WXA9 508 aaKnown RBP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 ECHDC3Q96DC8 303 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 TTC1Q99614 292 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 TM6SF2Q9BZW4 377 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 DEC1Q9P2X7 70 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 TLK1Q9UKI8 766 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 PLLPQ9Y342 182 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 PPIL1Q9Y3C6 166 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 PCDHB9Q9Y5E1 797 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 ACTL7AQ9Y615 435 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 PSAT1Q9Y617 370 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 GCN1Q92616 2671 aaKnown RBP12.61□□□□□ -0.39
CACNB3-214ENST00000550168 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
CACNB3-214ENST00000550168 TTC24A2A3L6 582 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-214ENST00000550168 HMX2A2RU54 273 aa12.6□□□□□ -0.39
CACNB3-214ENST00000550168 CAPN8A6NHC0 703 aa12.6□□□□□ -0.39
CACNB3-214ENST00000550168 GOLGA8CPA6NN73 597 aa12.6□□□□□ -0.39
CACNB3-214ENST00000550168 TPP1O14773 563 aa12.6□□□□□ -0.39
CACNB3-214ENST00000550168 NPC1O15118 1278 aa12.6□□□□□ -0.39
CACNB3-214ENST00000550168 BIRC5O15392 142 aa12.6□□□□□ -0.39
CACNB3-214ENST00000550168 STX7O15400 261 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms