RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 IP6K2Q9UHH9 426 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 PADI4Q9UM07 663 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 PCDHGC4Q9Y5F7 938 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 BAHCC1Q9P281 2608 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 A0A1W2PQ67 120 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 A8MX80 341 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 TNFP01375 233 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 CD48P09326 243 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 CTSEP14091 401 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 ERVPABLB-1P60509 514 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 MAXP61244 160 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 TPM4P67936 248 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 ZNF235Q14590 738 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 TCEA2Q15560 299 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 CNGA3Q16281 694 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 RALGPS1Q5JS13 557 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 ALKBH5Q6P6C2 394 aaKnown RBP13.47□□□□□ -0.25
GCN1-206ENST00000549815 RBM44Q6ZP01 1051 aaKnown RBP13.47□□□□□ -0.25
GCN1-206ENST00000549815 GKN2Q86XP6 184 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 CPNE8Q86YQ8 564 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 SPACA3Q8IXA5 215 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 TEX26Q8N6G2 289 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 GPR156Q8NFN8 814 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 OR56A4Q8NGH8 313 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 ATL2Q8NHH9 583 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 CPLX3Q8WVH0 158 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 ATXN7L3BQ96GX2 97 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 LGR4Q9BXB1 951 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 NOD2Q9HC29 1040 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 MRPL40Q9NQ50 206 aaKnown RBP13.47□□□□□ -0.25
GCN1-206ENST00000549815 RCOR3Q9P2K3 495 aaPredicted RBP13.47□□□□□ -0.25
GCN1-206ENST00000549815 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 FASNP49327 2511 aaKnown RBP13.47□□□□□ -0.25
GCN1-206ENST00000549815 MGAQ8IWI9 3026 aa13.47□□□□□ -0.25
GCN1-206ENST00000549815 PMS2P1A4D2B8 440 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 CACNB4O00305 520 aaPredicted RBP13.46□□□□□ -0.25
GCN1-206ENST00000549815 TNFRSF10CO14798 259 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 FZD6O60353 706 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 HEXIM1O94992 359 aaKnown RBP13.46□□□□□ -0.25
GCN1-206ENST00000549815 CPP00450 1065 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 LHCGRP22888 699 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.25
GCN1-206ENST00000549815 VIPR1P32241 457 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 SERPINB6P35237 376 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 CDH6P55285 790 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 PCBP4P57723 403 aaKnown RBP13.46□□□□□ -0.25
GCN1-206ENST00000549815 SKOR1P84550 965 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 TLE3Q04726 772 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 MMRN1Q13201 1228 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 IHHQ14623 411 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 C3orf38Q5JPI3 329 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 CCDC122Q5T0U0 273 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 PNCKQ6P2M8 343 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 OGFOD3Q6PK18 319 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 RD3Q7Z3Z2 195 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 ATPAF2Q8N5M1 289 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 ZNF248Q8NDW4 579 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 CCDC74AQ96AQ1 378 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 MCCC1Q96RQ3 725 aaPredicted RBP13.46□□□□□ -0.25
GCN1-206ENST00000549815 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 SIRPGQ9P1W8 387 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 GULP1Q9UBP9 304 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 GPR34Q9UPC5 381 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 DOLKQ9UPQ8 538 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 LUC7L2Q9Y383 392 aaKnown RBP13.46□□□□□ -0.25
GCN1-206ENST00000549815 PPIL1Q9Y3C6 166 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 PCDHGA8Q9Y5G5 932 aa13.46□□□□□ -0.25
GCN1-206ENST00000549815 A0A1W2PQM1 296 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 GOLGA6L19H0YKK7 550 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 MYO1FO00160 1098 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 MFSD11O43934 449 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 PGLSO95336 258 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 CASP14P31944 242 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 MMP13P45452 471 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 DPYSL3Q14195 570 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 ACOX1Q15067 660 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 PAFAH1B3Q15102 231 aaKnown RBP13.45□□□□□ -0.26
GCN1-206ENST00000549815 PTPRRQ15256 657 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 NFKBIBQ15653 356 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 ASTE1Q2TB18 679 aaPredicted RBP13.45□□□□□ -0.26
GCN1-206ENST00000549815 MARC1Q5VT66 337 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 NCBP2-AS2Q69YL0 99 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 SFTPA2Q8IWL1 248 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 CCL4L1Q8NHW4 92 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
GCN1-206ENST00000549815 PDCD6IPQ8WUM4 868 aaKnown RBP13.45□□□□□ -0.26
GCN1-206ENST00000549815 PIH1D2Q8WWB5 315 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 SCG3Q8WXD2 468 aaKnown RBP13.45□□□□□ -0.26
GCN1-206ENST00000549815 MAML1Q92585 1016 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 NUS1Q96E22 293 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 SCRN2Q96FV2 425 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 SLC46A1Q96NT5 459 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 TEX101Q9BY14 249 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 WDR26Q9H7D7 661 aa13.45□□□□□ -0.26
GCN1-206ENST00000549815 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms