RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 SATB1Q01826 763 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 ACVR1Q04771 509 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 IFFO1Q0D2I5 559 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 ELP6Q0PNE2 266 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 NAB1Q13506 487 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 CST6Q15828 149 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 LONRF1Q17RB8 773 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 PDPK2PQ6A1A2 396 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 FBXL19Q6PCT2 694 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 TTC7BQ86TV6 843 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 MMAAQ8IVH4 418 aaKnown RBP17.44■□□□□ 0.38
LETMD1-215ENST00000548390 FBF1Q8TES7 1133 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 TMEM109Q9BVC6 243 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 ROPN1BQ9BZX4 212 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-215ENST00000548390 ROPN1Q9HAT0 212 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-215ENST00000548390 ZFYVE1Q9HBF4 777 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 PLAC1Q9HBJ0 212 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 ZDHHC4Q9NPG8 344 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 SARDHQ9UL12 918 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 MYO10Q9HD67 2058 aa17.44■□□□□ 0.38
LETMD1-215ENST00000548390 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 C1orf232A0A0U1RR37 186 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 ZCWPW2A0A1B0GU75 182 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 A0A1W2PQF6 199 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 STX7O15400 261 aaKnown RBP17.43■□□□□ 0.38
LETMD1-215ENST00000548390 CD72P21854 359 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 TARSP26639 723 aaKnown RBP17.43■□□□□ 0.38
LETMD1-215ENST00000548390 NMBRP28336 390 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 VIPR1P32241 457 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 PSMD8P48556 350 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 ZNF140P52738 457 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-215ENST00000548390 PTPN5P54829 565 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 MGAT5Q09328 741 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 ZDHHC20Q5W0Z9 365 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 CAPN12Q6ZSI9 719 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 ERN2Q76MJ5 926 aaKnown RBP17.43■□□□□ 0.38
LETMD1-215ENST00000548390 DPPA4Q7L190 304 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 PARS2Q7L3T8 475 aaKnown RBP17.43■□□□□ 0.38
LETMD1-215ENST00000548390 LMNTD2Q8IXW0 634 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 SIX5Q8N196 739 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 TTC30BQ8N4P2 665 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 MDGA1Q8NFP4 955 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 MFSD3Q96ES6 412 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 CERS2Q96G23 380 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 LMAN1LQ9HAT1 526 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 RAD18Q9NS91 495 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 NLE1Q9NVX2 485 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-215ENST00000548390 ZNF446Q9NWS9 450 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 RABGEF1Q9UJ41 708 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 PKP3Q9Y446 797 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 ARL5AQ9Y689 179 aa17.43■□□□□ 0.38
LETMD1-215ENST00000548390 EXOC1LA0A1B0GW35 172 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 ANTXRLA6NF34 631 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 SLC7A4O43246 635 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 RPP40O75818 363 aaKnown RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 PRKCGP05129 697 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 ALPIP09923 528 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 PIRTP0C851 137 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 COPAP53621 1224 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 RPS14P62263 151 aaKnown RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 ILF2Q12905 390 aaKnown RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 ARHGEF7Q14155 803 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 UBXN2BQ14CS0 331 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 CNGA3Q16281 694 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 CDKN3Q16667 212 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 ESRP1Q6NXG1 681 aaKnown RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 CALML6Q8TD86 181 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 SCG3Q8WXD2 468 aaKnown RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 ARRDC3Q96B67 414 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 FCRL3Q96P31 734 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 ZIM3Q96PE6 472 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 IER2Q9BTL4 223 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 POLMQ9NP87 494 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 C20orf96Q9NUD7 363 aaPredicted RBP17.42■□□□□ 0.38
LETMD1-215ENST00000548390 NSMCE4AQ9NXX6 385 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 B4GALT6Q9UBX8 382 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 SLC24A2Q9UI40 661 aa17.42■□□□□ 0.38
LETMD1-215ENST00000548390 RGSL1A5PLK6 1076 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 NPIPB15A6NHN6 443 aaPredicted RBP17.41■□□□□ 0.38
LETMD1-215ENST00000548390 FAM159BA6NKW6 160 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 FAM170BA6NMN3 283 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 H0Y858 1186 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 PSMD11O00231 422 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 AP1G1O43747 822 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 DNTTP04053 509 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 ADRB3P13945 408 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 DGKEP52429 567 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 FAM193AP78312 1265 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 PRAMEP78395 509 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 RASA2Q15283 850 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 CRY1Q16526 586 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 KIAA1211LQ6NV74 962 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 CRTC1Q6UUV9 634 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 SYT13Q7L8C5 426 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 LYSMD3Q7Z3D4 306 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 KCNMB4Q86W47 210 aa17.41■□□□□ 0.38
LETMD1-215ENST00000548390 LRRC6Q86X45 466 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms