RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ACSL3O95573 720 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 SEMA4FO95754 770 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 IGLV3-19P01714 112 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 PRNPP04156 253 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 MAOBP27338 520 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 ELK3P41970 407 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 EIF3BP55884 814 aaKnown RBP17.49■□□□□ 0.39
HDAC7-227ENST00000548080 MAXP61244 160 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 CREB5Q02930 508 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 NIPAL4Q0D2K0 466 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 GPS2Q13227 327 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 MPP3Q13368 585 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 MTM1Q13496 603 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 LRRC73Q5JTD7 316 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 UBAP2Q5T6F2 1119 aaKnown RBP17.49■□□□□ 0.39
HDAC7-227ENST00000548080 FAM46CQ5VWP2 391 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 LINC00523Q86TU6 105 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 PRPF39Q86UA1 669 aaKnown RBP17.49■□□□□ 0.39
HDAC7-227ENST00000548080 TMIEQ8NEW7 156 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 OR14C36Q8NHC7 312 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 SNX19Q92543 992 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 NSMCE3Q96MG7 304 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 PSKH2Q96QS6 385 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 POLR1EQ9GZS1 481 aaKnown RBP17.49■□□□□ 0.39
HDAC7-227ENST00000548080 BTBD1Q9H0C5 482 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 CASS4Q9NQ75 786 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 TEX264Q9Y6I9 313 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 DOCK9Q9BZ29 2069 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 AP3B1O00203 1094 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 POP4O95707 220 aaKnown RBP17.48■□□□□ 0.39
HDAC7-227ENST00000548080 MT-CYBP00156 380 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-227ENST00000548080 ABHD2P08910 425 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 C7P10643 843 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 TSHRP16473 764 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 ITPKAP23677 461 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 OXTRP30559 389 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 DSC2Q02487 901 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 IFFO1Q0D2I5 559 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 AGBL4Q5VU57 503 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 ALG1LQ6GMV1 187 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 NAPEPLDQ6IQ20 393 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 NCEH1Q6PIU2 408 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 USP30Q70CQ3 517 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 PARS2Q7L3T8 475 aaKnown RBP17.48■□□□□ 0.39
HDAC7-227ENST00000548080 PALM2Q8IXS6 379 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 OR52K1Q8NGK4 314 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 OR2W6PQ8NHA6 318 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 UHMK1Q8TAS1 419 aaKnown RBP17.48■□□□□ 0.39
HDAC7-227ENST00000548080 ARRDC2Q8TBH0 407 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 PIGKQ92643 395 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 SIGLEC10Q96LC7 697 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 KLHL32Q96NJ5 620 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 MGME1Q9BQP7 344 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 WDR83Q9BRX9 315 aaKnown RBP17.48■□□□□ 0.39
HDAC7-227ENST00000548080 LRRC4CQ9HCJ2 640 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 DYRK4Q9NR20 520 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 VPS45Q9NRW7 570 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 GMEB2Q9UKD1 530 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 SCML1Q9UN30 329 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 CHMP2BQ9UQN3 213 aa17.48■□□□□ 0.39
HDAC7-227ENST00000548080 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.48■□□□□ 0.39
HDAC7-227ENST00000548080 SDR42E2A6NKP2 422 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 MEI4A8MW99 385 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 USP12O75317 370 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 FSBPO95073 299 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 EPN2O95208 641 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 CD86P42081 329 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 SCNN1BP51168 640 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 ADPRHP54922 357 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 SPEM2Q0P670 501 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 OLIG2Q13516 323 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 PIP5KL1Q5T9C9 394 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 LYSMD4Q5XG99 296 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 KDELC1Q6UW63 502 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 CYP2U1Q7Z449 544 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 SRLQ86TD4 932 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 C11orf74Q86VG3 221 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 IGDCC3Q8IVU1 814 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 AGGF1Q8N302 714 aaeCLIP17.47■□□□□ 0.39
HDAC7-227ENST00000548080 IPMKQ8NFU5 416 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 SEMA3CQ99985 751 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 TBL1YQ9BQ87 522 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 VPS37BQ9H9H4 285 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 FAM53CQ9NYF3 392 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 SLCO1B1Q9Y6L6 691 aa17.47■□□□□ 0.39
HDAC7-227ENST00000548080 FAM186AA6NE01 2351 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 C16orf96A6NNT2 1141 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 OPA1O60313 960 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 PMPCBO75439 489 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 CPP00450 1065 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 SHBGP04278 402 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 MMP2P08253 660 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 CES1P23141 567 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 ADRA1AP35348 466 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 NPY2RP49146 381 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 WNT3AP56704 352 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 SESN2P58004 480 aaPredicted RBP17.46■□□□□ 0.39
HDAC7-227ENST00000548080 PPP2CBP62714 309 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 PPP2CAP67775 309 aa17.46■□□□□ 0.39
HDAC7-227ENST00000548080 SKOR1P84550 965 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms