RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PCDH9Q9HC56 1237 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 SPTY2D1-AS1A0A0U1RR47 76 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 SPAARA0A1B0GVQ0 90 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 GOLGA8CPA6NN73 597 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 HACD1B0YJ81 288 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 MTSS1O43312 755 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 NRDCO43847 1150 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 HEXIM1O94992 359 aaKnown RBP18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 ITGAVP06756 1048 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 ALPIP09923 528 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 CA4P22748 312 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 LHCGRP22888 699 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 HNF1BP35680 557 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 GRK6P43250 576 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 EPHB1P54762 984 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 WASHC5Q12768 1159 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 XRCC4Q13426 336 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 FZD2Q14332 565 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 ACOX1Q15067 660 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 NOMO1Q15155 1222 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 ZNF662Q6ZS27 426 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 NDUFAF2Q8N183 169 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 CBARPQ8N350 705 aaPredicted RBP18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 ACTL9Q8TC94 416 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 IMP4Q96G21 291 aaKnown RBP18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 TEKT5Q96M29 485 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 RBM15Q96T37 977 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 SLC25A51Q9H1U9 297 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 CAAP1Q9H8G2 361 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 GLOD4Q9HC38 313 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 LZTFL1Q9NQ48 299 aa18.78■□□□□ 0.6
PRPF40B-206ENST00000547764 A0A0J9YYE9 177 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 A0A0U1RQS6 177 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 H7C0C1 242 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 TOR1BO14657 336 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 SDC3O75056 442 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 TJP3O95049 919 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 TRBC1P01850 177 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 ATP5OP48047 213 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 RPL26P61254 145 aaKnown RBP18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 YPEL5P62699 121 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 OTUD4Q01804 1114 aaKnown RBP18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 TRIP6Q15654 476 aaKnown RBP18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 ZNF542PQ5EBM4 170 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 DENND2CQ68D51 928 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 KANSL1Q7Z3B3 1105 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 TSPAN33Q86UF1 283 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 LPCAT1Q8NF37 534 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 BAHD1Q8TBE0 780 aaPredicted RBP18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 HTR3CQ8WXA8 447 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 IFT43Q96FT9 208 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 COQ10AQ96MF6 247 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 C10orf88Q9H8K7 445 aa18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 RPL26L1Q9UNX3 145 aaKnown RBP18.77■□□□□ 0.6
PRPF40B-206ENST00000547764 PCCBP05166 539 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 ADRB1P08588 477 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 CD68P34810 354 aaPredicted RBP18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 THOP1P52888 689 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 SIM1P81133 766 aaPredicted RBP18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 FOXK2Q01167 660 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 ARHGEF7Q14155 803 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 PTK2BQ14289 1009 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 INPP5AQ14642 412 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 CRTC1Q6UUV9 634 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 HSD11B1LQ7Z5J1 315 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 PARGQ86W56 976 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 PLA2G15Q8NCC3 412 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 SPATA22Q8NHS9 363 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 TADA1Q96BN2 335 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 FAM118BQ9BPY3 351 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 DNAJC28Q9NX36 388 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 NCOR2Q9Y618 2525 aa18.76■□□□□ 0.59
PRPF40B-206ENST00000547764 CAPN8A6NHC0 703 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 PSMD11O00231 422 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 MT-CYBP00156 380 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 RBL1P28749 1068 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 ETV3P41162 512 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 EIF3EP60228 445 aaKnown RBP18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 EIF2B5Q13144 721 aaKnown RBP18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 MTM1Q13496 603 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 QPCTQ16769 361 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 INAVAQ3KP66 663 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 LRRC66Q68CR7 880 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 PID1Q7Z2X4 250 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 ZNF567Q8N184 647 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 NUS1Q96E22 293 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 TRIB3Q96RU7 358 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 VAT1Q99536 393 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 CDC6Q99741 560 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 APOOQ9BUR5 198 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 KLHL8Q9P2G9 620 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 KLF15Q9UIH9 416 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 PPP2R2CQ9Y2T4 447 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 OR1A2Q9Y585 309 aa18.75■□□□□ 0.59
PRPF40B-206ENST00000547764 TDRD6O60522 2096 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 ANKRD66B4E2M5 251 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 PIAS2O75928 621 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 CSF2P04141 144 aa18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 PTMAP06454 111 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-206ENST00000547764 RBP3P10745 1247 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms