RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GATA5Q9BWX5 397 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 HEMGNQ9BXL5 484 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 HDHD5Q9BXW7 423 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 XPO4Q9C0E2 1151 aaKnown RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 VPS33BQ9H267 617 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 OPA3Q9H6K4 179 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 SAP30LQ9HAJ7 183 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 ENTPD7Q9NQZ7 604 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 SLC22A11Q9NSA0 550 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 BABAM1Q9NWV8 329 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 NCKIPSDQ9NZQ3 722 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 OGFRQ9NZT2 677 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 DLGAP2Q9P1A6 1054 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 KIAA1456Q9P272 454 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 WDR35Q9P2L0 1181 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 AMFRQ9UKV5 643 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 INTS6Q9UL03 887 aaKnown RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 NENFQ9UMX5 172 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 MED1Q15648 1581 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 LOC100509620A0A075B734 347 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 TRAV34A0A0B4J273 112 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 A0A0U1RQK1 487 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 A0A1W2PRG0 241 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 ZNF320A2RRD8 509 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 A6NL46 340 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 TTC34A8MYJ7 566 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 DDX39AO00148 427 aaKnown RBP4.39□□□□□ -1.71
SCAF11-210ENST00000547654 CES2O00748 559 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 ADAM10O14672 748 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SCAMP1O15126 338 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 LIASO43766 372 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 HS6ST1O60243 411 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 OAZ2O95190 189 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 MT-CO3P00414 261 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 MT-ND3P03897 115 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SELLP14151 372 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 TMEM11P17152 192 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 IGFBP2P18065 325 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 CD72P21854 359 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 CIITAP33076 1130 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 JAK3P52333 1124 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SCN1BQ07699 218 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SRSF1Q07955 248 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SNTB1Q13884 538 aaKnown RBP4.39□□□□□ -1.71
SCAF11-210ENST00000547654 ASTE1Q2TB18 679 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-210ENST00000547654 EDRF1Q3B7T1 1238 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 NAPEPLDQ6IQ20 393 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 CAVIN1Q6NZI2 390 aaKnown RBP4.39□□□□□ -1.71
SCAF11-210ENST00000547654 CATSPER4Q7RTX7 472 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 FAM160B2Q86V87 743 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 KBTBD6Q86V97 674 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 LMNTD2Q8IXW0 634 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SIRT6Q8N6T7 355 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 C10orf53Q8N6V4 93 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 NAT8LQ8N9F0 302 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 GRK7Q8WTQ7 553 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 CCDC114Q96M63 670 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 FIZ1Q96SL8 496 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 KIFC3Q9BVG8 833 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 ANKRD2Q9GZV1 360 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 OSGEPL1Q9H4B0 414 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SFXN1Q9H9B4 322 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 SNTG1Q9NSN8 517 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 ADPRHL2Q9NX46 363 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 COQ3Q9NZJ6 369 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 MGAT4CQ9UBM8 478 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 MOSPD1Q9UJG1 213 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 HAO1Q9UJM8 370 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 A4GNTQ9UNA3 340 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 DHDHQ9UQ10 334 aa4.39□□□□□ -1.71
SCAF11-210ENST00000547654 A0A1W2PQF6 199 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 URADA6NGE7 173 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 BTBD19C9JJ37 291 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 H0YAE9 185 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 RTCAO00442 366 aaKnown RBP4.38□□□□□ -1.71
SCAF11-210ENST00000547654 CHL1O00533 1208 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 STX6O43752 255 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 DIAPH2O60879 1101 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 PSMD10O75832 226 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 SEC31AO94979 1220 aaKnown RBP4.38□□□□□ -1.71
SCAF11-210ENST00000547654 FYNP06241 537 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 SRPRAP08240 638 aaKnown RBP4.38□□□□□ -1.71
SCAF11-210ENST00000547654 PTAFRP25105 342 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 DUSP1P28562 367 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 MATR3P43243 847 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCAF11-210ENST00000547654 CAMPP49913 170 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 GNAQP50148 359 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 BLKP51451 505 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 ALDH3A2P51648 485 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 ZNF131P52739 623 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 PMS2P54278 862 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 F2RL1P55085 397 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 YWHAZP63104 245 aaKnown RBP4.38□□□□□ -1.71
SCAF11-210ENST00000547654 GHRHRQ02643 423 aa4.38□□□□□ -1.71
SCAF11-210ENST00000547654 IKQ13123 557 aaPredicted RBP4.38□□□□□ -1.71
SCAF11-210ENST00000547654 BAATQ14032 418 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms