RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 C14orf177Q52M58 125 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 SGO1Q5FBB7 561 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 MAP3K21Q5TCX8 1036 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 SERTAD4-AS1Q5TG53 156 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 FAM122CQ6P4D5 195 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 WDR73Q6P4I2 378 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 BBS12Q6ZW61 710 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 MTSS1LQ765P7 747 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 SFR1Q86XK3 245 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 CHERPQ8IWX8 916 aaKnown RBP4.11□□□□□ -1.75
CCDC38-204ENST00000546816 AGBL3Q8NEM8 1001 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 DBF4BQ8NFT6 615 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 USP13Q92995 863 aaPredicted RBP4.11□□□□□ -1.75
CCDC38-204ENST00000546816 PYM1Q9BRP8 204 aaKnown RBP4.11□□□□□ -1.75
CCDC38-204ENST00000546816 HAUS8Q9BT25 410 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 NUF2Q9BZD4 464 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 KCNN2Q9H2S1 579 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 ESRP2Q9H6T0 727 aaKnown RBP4.11□□□□□ -1.75
CCDC38-204ENST00000546816 MKKSQ9NPJ1 570 aaPredicted RBP4.11□□□□□ -1.75
CCDC38-204ENST00000546816 KIAA1456Q9P272 454 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
CCDC38-204ENST00000546816 PCDHGB3Q9Y5G1 929 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 PSAT1Q9Y617 370 aa4.11□□□□□ -1.75
CCDC38-204ENST00000546816 COL2A1P02458 1487 aaPredicted RBP4.11□□□□□ -1.75
CCDC38-204ENST00000546816 FAM172BPA6NC97 362 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 LDHAP00338 332 aaKnown RBP4.1□□□□□ -1.75
CCDC38-204ENST00000546816 URODP06132 367 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 HLA-DOBP13765 273 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 ETFAP13804 333 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 AGAP20933 346 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 CLCN3P51790 818 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 ERVK11-1P61568 191 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 PHEXP78562 749 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 SYT16Q17RD7 645 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 TRMT1LQ7Z2T5 733 aaKnown RBP4.1□□□□□ -1.75
CCDC38-204ENST00000546816 DGLUCYQ7Z3D6 616 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 GPAT4Q86UL3 456 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 MYPOPQ86VE0 399 aaPredicted RBP4.1□□□□□ -1.75
CCDC38-204ENST00000546816 SCCPDHQ8NBX0 429 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 C17orf75Q9HAS0 396 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 KLHL1Q9NR64 748 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 IL1RAPL1Q9NZN1 696 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 CARD8Q9Y2G2 431 aa4.1□□□□□ -1.75
CCDC38-204ENST00000546816 PDS5AQ29RF7 1337 aaKnown RBP4.1□□□□□ -1.75
CCDC38-204ENST00000546816 GOLGA6L10A0A0M3HER8 536 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 A0A1B0GU03 582 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 TCEA3O75764 348 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 TBX6O95947 436 aaPredicted RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 HEXAP06865 529 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 MMP2P08253 660 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 CD58P19256 250 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 MARK3P27448 753 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 EIF2S3P41091 472 aaKnown RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 EFNA5P52803 228 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 ATP12AP54707 1039 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 EFNB1P98172 346 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 RELQ04864 619 aaPredicted RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 OS9Q13438 667 aaPredicted RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 TAF11Q15544 211 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 ACCSLQ4AC99 568 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 CCNI2Q6ZMN8 369 aaPredicted RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 DSG4Q86SJ6 1040 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 TADA2BQ86TJ2 420 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 TMTC1Q8IUR5 882 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 ODF3L1Q8IXM7 274 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 SPATA5Q8NB90 893 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 ZNF485Q8NCK3 441 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 FBXL8Q96CD0 374 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 RPS6KC1Q96S38 1066 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 SIN3AQ96ST3 1273 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 ARPC5LQ9BPX5 153 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 KXD1Q9BQD3 176 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 TRMT61BQ9BVS5 477 aaKnown RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 CSTL1Q9H114 145 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 TTYH1Q9H313 450 aaPredicted RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 PCDH9Q9HC56 1237 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 FBRSL1Q9HCM7 1045 aaKnown RBP4.09□□□□□ -1.75
CCDC38-204ENST00000546816 CNGB3Q9NQW8 809 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 STON1Q9Y6Q2 735 aa4.09□□□□□ -1.75
CCDC38-204ENST00000546816 C16orf97H3BN30 126 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 EDIL3O43854 480 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 CDH1P12830 882 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 CCR5P51681 352 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 ATG16L1Q676U5 607 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 GFRALQ6UXV0 394 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.08□□□□□ -1.76
CCDC38-204ENST00000546816 SLC9B2Q86UD5 537 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 TMEM219Q86XT9 240 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 CPOQ8IVL8 374 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 SLC35F3Q8IY50 421 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 TNIP2Q8NFZ5 429 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 SLC20A1Q8WUM9 679 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 ISCA1Q9BUE6 129 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 HEMGNQ9BXL5 484 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 MAGEE1Q9HCI5 957 aa4.08□□□□□ -1.76
CCDC38-204ENST00000546816 TMEM30AQ9NV96 361 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms