RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PGRMC1O00264 195 aaKnown RBP16.85■□□□□ 0.29
CCDC38-203ENST00000546803 RAD51BO15315 384 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 RECQL5O94762 991 aaPredicted RBP16.85■□□□□ 0.29
CCDC38-203ENST00000546803 WNT1P04628 370 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 ALPIP09923 528 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 GOLGA6DP0CG33 693 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 LHCGRP22888 699 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 ACTN2P35609 894 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 LIMK1P53667 647 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 SNX1Q13596 522 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 LRRC14Q15048 493 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 CNGA3Q16281 694 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 KIF19Q2TAC6 998 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 P3H1Q32P28 736 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 HS1BP3Q53T59 392 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 KYAT3Q6YP21 454 aaKnown RBP16.85■□□□□ 0.29
CCDC38-203ENST00000546803 DCP2Q8IU60 420 aaKnown RBP16.85■□□□□ 0.29
CCDC38-203ENST00000546803 CBARPQ8N350 705 aaPredicted RBP16.85■□□□□ 0.29
CCDC38-203ENST00000546803 ACTRT1Q8TDG2 376 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 LRRC45Q96CN5 670 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 KLHDC7BQ96G42 594 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 MRGPRX2Q96LB1 330 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 BMFQ96LC9 184 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 WDR24Q96S15 920 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 NAPGQ99747 312 aaPredicted RBP16.85■□□□□ 0.29
CCDC38-203ENST00000546803 MYOCQ99972 504 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 GOLGA6AQ9NYA3 693 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 COQ6Q9Y2Z9 468 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 NUMA1Q14980 2115 aa16.85■□□□□ 0.29
CCDC38-203ENST00000546803 CTAGE9A4FU28 777 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 TOR1BO14657 336 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 DFNA5O60443 496 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 CER1O95813 267 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 HLA-DPA1P20036 260 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 PSMB4P28070 264 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 CTSKP43235 329 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 RABIFP47224 123 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 GDF10P55107 478 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 CLDN2P57739 230 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 NXPH1P58417 271 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 BNC1Q01954 994 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 GALNT3Q14435 633 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 ACOX1Q15067 660 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 WSCD2Q2TBF2 565 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 PAPD7Q5XG87 772 aaKnown RBP16.84■□□□□ 0.29
CCDC38-203ENST00000546803 LRRC66Q68CR7 880 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 CRTC1Q6UUV9 634 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 LAYNQ6UX15 382 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 GCNT7Q6ZNI0 430 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 KDELC2Q7Z4H8 507 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 TSPAN33Q86UF1 283 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 KLHDC8BQ8IXV7 354 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 PRELID2Q8N945 189 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 TP53I13Q8NBR0 393 aaPredicted RBP16.84■□□□□ 0.29
CCDC38-203ENST00000546803 IPMKQ8NFU5 416 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 NETO1Q8TDF5 533 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 COG1Q8WTW3 980 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 MS4A14Q96JA4 679 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 COQ10AQ96MF6 247 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 GTPBP2Q9BX10 602 aaKnown RBP16.84■□□□□ 0.29
CCDC38-203ENST00000546803 FSD1LQ9BXM9 530 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 MAGEE1Q9HCI5 957 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 TMEM9BQ9NQ34 198 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 FSCN3Q9NQT6 498 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 GDF3Q9NR23 364 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 RXFP3Q9NSD7 469 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 CA5BQ9Y2D0 317 aa16.84■□□□□ 0.29
CCDC38-203ENST00000546803 POM121BA6NF01 834 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 F5H423 210 aaPredicted RBP16.83■□□□□ 0.28
CCDC38-203ENST00000546803 PSMD3O43242 534 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 IFNB1P01574 187 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 THEGLP0DJG4 465 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 SDHBP21912 280 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 STC1P52823 247 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 PFN3P60673 137 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 YPEL5P62699 121 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 SPAG17Q6Q759 2223 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 SDK1Q7Z5N4 2213 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 CCDC89Q8N998 374 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 CCHCR1Q8TD31 782 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 ZFHX2Q9C0A1 2572 aaPredicted RBP16.83■□□□□ 0.28
CCDC38-203ENST00000546803 ERVMER34-1Q9H9K5 563 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 SNX11Q9Y5W9 270 aa16.83■□□□□ 0.28
CCDC38-203ENST00000546803 C1orf232A0A0U1RR37 186 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.82■□□□□ 0.28
CCDC38-203ENST00000546803 H0Y8X5 98 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 CDX4O14627 284 aaPredicted RBP16.82■□□□□ 0.28
CCDC38-203ENST00000546803 GDF9O60383 454 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 FGF1P05230 155 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 ATXN1LP0C7T5 689 aaKnown RBP16.82■□□□□ 0.28
CCDC38-203ENST00000546803 GM2AP17900 193 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 IGFALSP35858 605 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 PTSQ03393 145 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 MTM1Q13496 603 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 PTPRRQ15256 657 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 IRF4Q15306 451 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 SLC1A5Q15758 541 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 CDKN3Q16667 212 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 HLA-BQ31612 363 aa16.82■□□□□ 0.28
CCDC38-203ENST00000546803 SIRPB2Q5JXA9 342 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms