RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 SLC10A7Q0GE19 358 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 PIGHQ14442 188 aaPredicted RBP18.8■□□□□ 0.6
CHPT1-202ENST00000546490 ACOX1Q15067 660 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 BOLA3Q53S33 107 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 FOXR1Q6PIV2 292 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 ATPAF2Q8N5M1 289 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 OR1E3Q8WZA6 343 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 SPOCK2Q92563 424 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 LIN37Q96GY3 246 aaPredicted RBP18.8■□□□□ 0.6
CHPT1-202ENST00000546490 NAP1L5Q96NT1 182 aaPredicted RBP18.8■□□□□ 0.6
CHPT1-202ENST00000546490 SLC46A1Q96NT5 459 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 GFM1Q96RP9 751 aaKnown RBP18.8■□□□□ 0.6
CHPT1-202ENST00000546490 FGF22Q9HCT0 170 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 B4GALT6Q9UBX8 382 aa18.8■□□□□ 0.6
CHPT1-202ENST00000546490 TMEM202A6NGA9 273 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 D6RAR5 112 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 CPP00450 1065 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 HOXC4P09017 264 aaPredicted RBP18.79■□□□□ 0.6
CHPT1-202ENST00000546490 IL1R2P27930 398 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 NYAP1Q6ZVC0 841 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 POLNQ7Z5Q5 900 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 TP53INP2Q8IXH6 220 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 PDCD6IPQ8WUM4 868 aaKnown RBP18.79■□□□□ 0.6
CHPT1-202ENST00000546490 NSMCE1Q8WV22 266 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 NUS1Q96E22 293 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 CSPG4P5Q96PW8 444 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 NUDCD1Q96RS6 583 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 KCTD5Q9NXV2 234 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 RABGEF1Q9UJ41 708 aa18.79■□□□□ 0.6
CHPT1-202ENST00000546490 BZW2Q9Y6E2 419 aaKnown RBP18.79■□□□□ 0.6
CHPT1-202ENST00000546490 ZFC3H1O60293 1989 aaKnown RBP18.79■□□□□ 0.6
CHPT1-202ENST00000546490 UNC13CQ8NB66 2214 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 A0A1W2PQJ5 194 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 CDRT15L2A8MXV6 281 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 TMX2-CTNND1H3BSU7 103 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 PDE2AO00408 941 aaPredicted RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 TNFRSF10CO14798 259 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 CASC3O15234 703 aaKnown RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 HTRA2O43464 458 aaPredicted RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 RPLP0P05388 317 aaKnown RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 TCF4P15884 667 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 AMPD1P23109 780 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 C19orf57Q0VDD7 668 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 EIF3IQ13347 325 aaKnown RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 NR1I3Q14994 352 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 IQCB1Q15051 598 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 TSR1Q2NL82 804 aaKnown RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 KCTD16Q68DU8 428 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 TAF8Q7Z7C8 310 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 NIPA2Q8N8Q9 360 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 TEKT4Q8WW24 435 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 PRR11Q96HE9 360 aaPredicted RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 MGME1Q9BQP7 344 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 STRADBQ9C0K7 418 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 EPB41L5Q9HCM4 733 aa18.78■□□□□ 0.6
CHPT1-202ENST00000546490 MRPL40Q9NQ50 206 aaKnown RBP18.78■□□□□ 0.6
CHPT1-202ENST00000546490 A8MX80 341 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 ERVH48-1M5A8F1 160 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 TNFSF15O95150 251 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 PRB1P04280 392 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 ITGA2BP08514 1039 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 RARAP10276 462 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 CYP2A6P11509 494 aaPredicted RBP18.77■□□□□ 0.6
CHPT1-202ENST00000546490 MYCLP1P12525 358 aaPredicted RBP18.77■□□□□ 0.6
CHPT1-202ENST00000546490 GM2AP17900 193 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 CR2P20023 1033 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 VIPR1P32241 457 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 TRIM23P36406 574 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 CDH6P55285 790 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 SKOR1P84550 965 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 CNGA3Q16281 694 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 RALGPS1Q5JS13 557 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 HGSNATQ68CP4 663 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 PNCKQ6P2M8 343 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 CLEC14AQ86T13 490 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 FAM46DQ8NEK8 389 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 GPR156Q8NFN8 814 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 COQ10AQ96MF6 247 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 NSMCE3Q96MG7 304 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 CPNE5Q9HCH3 593 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 ETNK2Q9NVF9 386 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 IP6K2Q9UHH9 426 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 MOSPD1Q9UJG1 213 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 ANAPC7Q9UJX3 599 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 PCDHGC4Q9Y5F7 938 aa18.77■□□□□ 0.6
CHPT1-202ENST00000546490 PRSS38A1L453 326 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 TTC24A2A3L6 582 aaPredicted RBP18.76■□□□□ 0.59
CHPT1-202ENST00000546490 PMS2P1A4D2B8 440 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 B4DGG1 531 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 PLD2O14939 933 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 MAFKO60675 156 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 PEX11BO96011 259 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 GLB1P16278 677 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 MMP13P45452 471 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 CCL7P80098 99 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 RHDQ02161 417 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 SLC25A11Q02978 314 aaKnown RBP18.76■□□□□ 0.59
CHPT1-202ENST00000546490 KRT81Q14533 505 aa18.76■□□□□ 0.59
CHPT1-202ENST00000546490 CERCAMQ5T4B2 595 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms