RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CDK4P11802 303 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 CTPS1P17812 591 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 CD86P42081 329 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 BLKP51451 505 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 NIPAL4Q0D2K0 466 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 ZBTB17Q13105 803 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 EIF2B5Q13144 721 aaKnown RBP15.76■□□□□ 0.11
CCDC78-216ENST00000544996 CNGA3Q16281 694 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 PPP2R5EQ16537 467 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 TPRG1LQ5T0D9 272 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 FAXCQ5TGI0 409 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 CCDC181Q5TID7 509 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 DENND2CQ68D51 928 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 KDM7AQ6ZMT4 941 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 OR4C6Q8NH72 309 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 AGAP3Q96P47 875 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 DESI2Q9BSY9 194 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 DUSP23Q9BVJ7 150 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 TDRD1Q9BXT4 1180 aaKnown RBP15.76■□□□□ 0.11
CCDC78-216ENST00000544996 ADGRE3Q9BY15 652 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 PCDH9Q9HC56 1237 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 UCKL1Q9NWZ5 548 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 TOR4AQ9NXH8 423 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 SPASTQ9UBP0 616 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 DNPEPQ9ULA0 475 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 WASF3Q9UPY6 502 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 CHKBQ9Y259 395 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 NEUROG3Q9Y4Z2 214 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 OR1A2Q9Y585 309 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 CSNK1G3Q9Y6M4 447 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 A0A0J9YYE9 177 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 PCNX2A6NKB5 2137 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 CACNB4O00305 520 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-216ENST00000544996 TRIM38O00635 465 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 SCAMP1O15126 338 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 TOP3BO95985 862 aaKnown RBP15.75■□□□□ 0.11
CCDC78-216ENST00000544996 TRBC1P01850 177 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 C1SP09871 688 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 PECAM1P16284 738 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-216ENST00000544996 ZNF30P17039 623 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 CKMT2P17540 419 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 SPINK2P20155 84 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 KELP23276 732 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 HNF1BP35680 557 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 RWDD2BP57060 319 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 PPARDQ03181 441 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 NFATC4Q14934 902 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 TEX44Q53QW1 395 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 PEX26Q7Z412 305 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 NT5DC3Q86UY8 548 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 PHACTR4Q8IZ21 702 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 CNTD1Q8N815 330 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 ZNF548Q8NEK5 533 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-216ENST00000544996 NUS1Q96E22 293 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 COQ10AQ96MF6 247 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 HEMGNQ9BXL5 484 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 CEP41Q9BYV8 373 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 EVA1BQ9NVM1 165 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 NLGN3Q9NZ94 848 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 APOBEC3BQ9UH17 382 aaKnown RBP15.75■□□□□ 0.11
CCDC78-216ENST00000544996 KLF15Q9UIH9 416 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 AMFRQ9UKV5 643 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 EFR3BQ9Y2G0 817 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 PCDHGA1Q9Y5H4 931 aa15.75■□□□□ 0.11
CCDC78-216ENST00000544996 DOCK9Q9BZ29 2069 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 GRID2IPA4D2P6 1211 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 PDE2AO00408 941 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-216ENST00000544996 AQP9O43315 295 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 SIGLEC6O43699 453 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 DKK1O94907 266 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 ALPIP09923 528 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 LHCGRP22888 699 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 CTNNA2P26232 953 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 SKOR1P84550 965 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 DAB2P98082 770 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 ADCY2Q08462 1091 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 DNAJC3Q13217 504 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 PRKD1Q15139 912 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-216ENST00000544996 PRRT3Q5FWE3 981 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 LRRC66Q68CR7 880 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 ESRP1Q6NXG1 681 aaKnown RBP15.74■□□□□ 0.11
CCDC78-216ENST00000544996 PNCKQ6P2M8 343 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 ENPP7Q6UWV6 458 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 BBS12Q6ZW61 710 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 B4GALNT4Q76KP1 1039 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 HSD11B1LQ7Z5J1 315 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 ZC3H18Q86VM9 953 aaKnown RBP15.74■□□□□ 0.11
CCDC78-216ENST00000544996 HID1Q8IV36 788 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 UBL4BQ8N7F7 174 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 LRRC57Q8N9N7 239 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 PLA2G15Q8NCC3 412 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 CCDC112Q8NEF3 446 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 LPCAT1Q8NF37 534 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 LMX1AQ8TE12 382 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 DTD2Q96FN9 168 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 IMP4Q96G21 291 aaKnown RBP15.74■□□□□ 0.11
CCDC78-216ENST00000544996 TBATAQ96M53 351 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 WDR92Q96MX6 357 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 FERMT1Q9BQL6 677 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 SLC25A51Q9H1U9 297 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms