RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 C19orf18Q8NEA5 215 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 BPIFB6Q8NFQ5 453 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 DLG3Q92796 817 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 MFSD3Q96ES6 412 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 HDHD2Q9H0R4 259 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 KCNE2Q9Y6J6 123 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 EDF1O60869 148 aaKnown RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 NPY5RQ15761 445 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 RNF44Q7L0R7 432 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 GPR180Q86V85 440 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 NPAS2Q99743 824 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.36
CHD4-211ENST00000544484 PAIP2BQ9ULR5 123 aaKnown RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 COPG1Q9Y678 874 aaKnown RBP12.83□□□□□ -0.36
CHD4-211ENST00000544484 TRIM43BA6NCK2 446 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 IQCF5A8MTL0 148 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 BPGMP07738 259 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TIGD2Q4W5G0 525 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 UBE2R2Q712K3 238 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 SLC26A9Q7LBE3 791 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 RASAL3Q86YV0 1011 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 FAM20CQ8IXL6 584 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 OR7D4Q8NG98 312 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 CDH19Q9H159 772 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 EPB41L4BQ9H329 900 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TRMT13Q9NUP7 481 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 IMP3Q9NV31 184 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 RAI2Q9Y5P3 530 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 SERPINA6P08185 405 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TACR2P21452 398 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 ADSSP30520 456 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 INTS11Q5TA45 600 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 ZNF549Q6P9A3 640 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 CUZD1Q86UP6 607 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 ZCCHC7Q8N3Z6 543 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 SLC44A1Q8WWI5 657 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TRAF6Q9Y4K3 522 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 WBP4O75554 376 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 SKP1P63208 163 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 GNA13Q14344 377 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 C16orf72Q14CZ0 275 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 HECTD2Q5U5R9 776 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 RSBN1Q5VWQ0 802 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 FUT10Q6P4F1 479 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 CAMK1DQ8IU85 385 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TERB1Q8NA31 727 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 ZNF398Q8TD17 642 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 OR8D1Q8WZ84 308 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.362e-10■■■■■ 37.6
CHD4-211ENST00000544484 TBATAQ96M53 351 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TRAPPC9Q96Q05 1148 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 ARHGEF4Q9NR80 690 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 ZNF214Q9UL59 606 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 PCDHGC4Q9Y5F7 938 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 SLIT3O75094 1523 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 PTDSS1P48651 473 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 TSNQ15631 228 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 RNASEH2BQ5TBB1 312 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 LYPLAL1Q5VWZ2 237 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 RP9Q8TA86 221 aaKnown RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 NXNL1Q96CM4 212 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 NMUR1Q9HB89 426 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 SLC28A1O00337 649 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 CHRNB2P17787 502 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 MPP1Q00013 466 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 SLC44A4Q53GD3 710 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 ARMC4Q5T2S8 1044 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 GET4Q7L5D6 327 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 C8orf59Q8N0T1 100 aaPredicted RBP12.82□□□□□ -0.36
CHD4-211ENST00000544484 SNX27Q96L92 541 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 OR52E6Q96RD3 313 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 TLE6Q9H808 572 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
CHD4-211ENST00000544484 LOC100506127A0A0U1RQW1 187 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 NR2F1P10589 423 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 METTL3Q86U44 580 aaKnown RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 OFCC1Q8IZS5 231 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 RDH11Q8TC12 318 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 CLEC4CQ8WTT0 213 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 REXO5Q96IC2 774 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms