RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TMPRSS6Q8IU80 811 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 CCDC126Q96EE4 140 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 MOCOSQ96EN8 888 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 TMA16Q96EY4 203 aaKnown RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 NSMCE3Q96MG7 304 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 ZBP1Q9H171 429 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 NLE1Q9NVX2 485 aaPredicted RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 NCKIPSDQ9NZQ3 722 aa17.11■□□□□ 0.33
PTPRO-209ENST00000543886 LSM7Q9UK45 103 aaKnown RBP17.11■□□□□ 0.33
PTPRO-209ENST00000543886 C2orf81A6NN90 581 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 NPHS1O60500 1241 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 OLFM2O95897 454 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 GABRR2P28476 465 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 MZF1P28698 734 aaPredicted RBP17.1■□□□□ 0.33
PTPRO-209ENST00000543886 CCR10P46092 362 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 GJA8P48165 433 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 DNAJB13P59910 316 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 ACAP2Q15057 778 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 FSCBQ5H9T9 825 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 PIWIL4Q7Z3Z4 852 aaKnown RBP17.1■□□□□ 0.33
PTPRO-209ENST00000543886 ADAMTS19Q8TE59 1207 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 PDCD6IPQ8WUM4 868 aaKnown RBP17.1■□□□□ 0.33
PTPRO-209ENST00000543886 MRPS31Q92665 395 aaKnown RBP17.1■□□□□ 0.33
PTPRO-209ENST00000543886 CDKN2AIPNLQ96HQ2 116 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 MMADHCQ9H3L0 296 aaPredicted RBP17.1■□□□□ 0.33
PTPRO-209ENST00000543886 PCDHGC4Q9Y5F7 938 aa17.1■□□□□ 0.33
PTPRO-209ENST00000543886 SLCO1B7G3V0H7 640 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 MATN2O00339 956 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 KIAA0355O15063 1070 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 HDAC3O15379 428 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 TGM5O43548 720 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 LILRB3O75022 631 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 LRG1P02750 347 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 CNPP09543 421 aaKnown RBP17.09■□□□□ 0.33
PTPRO-209ENST00000543886 SLC26A3P40879 764 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 E2F5Q15329 346 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 SLC9B1Q4ZJI4 515 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 AFTPHQ6ULP2 937 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 Q6ZNB5 142 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 UBXN10Q96LJ8 280 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 FEM1AQ9BSK4 669 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 VTI1BQ9UEU0 232 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 ZMPSTE24O75844 475 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 SNUPNO95149 360 aaKnown RBP17.09■□□□□ 0.33
PTPRO-209ENST00000543886 PRLP01236 227 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 CKMP06732 381 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 CTSAP10619 480 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 FDXRP22570 491 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 PGM1P36871 562 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 SERPINB5P36952 375 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 STC1P52823 247 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 CYP4F8P98187 520 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 PFKPQ01813 784 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 SEMA3AQ14563 771 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 DNAL1Q4LDG9 190 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 TRIM67Q6ZTA4 783 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 PIM3Q86V86 326 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 RBM15BQ8NDT2 890 aaKnown RBP17.09■□□□□ 0.33
PTPRO-209ENST00000543886 OR4K2Q8NGD2 314 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 DENND2DQ9H6A0 471 aaPredicted RBP17.09■□□□□ 0.33
PTPRO-209ENST00000543886 TCF7L2Q9NQB0 619 aa17.09■□□□□ 0.33
PTPRO-209ENST00000543886 INTS10Q9NVR2 710 aaKnown RBP17.09■□□□□ 0.33
PTPRO-209ENST00000543886 ZBBXA8MT70 800 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 E9PBE3 544 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 GREM1O60565 184 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 KLHL41O60662 606 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 PDHA1P08559 390 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 CSKP41240 450 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 RHOAP61586 193 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 TYSND1Q2T9J0 566 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 INO80DQ53TQ3 878 aaPredicted RBP17.08■□□□□ 0.33
PTPRO-209ENST00000543886 GPR158Q5T848 1215 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 METTL21CQ5VZV1 264 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 MAB21L3Q8N8X9 362 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 MAPK15Q8TD08 544 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 ANKRD49Q8WVL7 239 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 BHMTQ93088 406 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 SHCBP1LQ9BZQ2 653 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 MAN1C1Q9NR34 630 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 LHX3Q9UBR4 397 aa17.08■□□□□ 0.33
PTPRO-209ENST00000543886 WISP3O95389 354 aaPredicted RBP17.08■□□□□ 0.32
PTPRO-209ENST00000543886 CD160O95971 181 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 TFEBP19484 476 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 LPOP22079 712 aaPredicted RBP17.08■□□□□ 0.32
PTPRO-209ENST00000543886 ZXDBP98169 803 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 ZNF549Q6P9A3 640 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 NCEH1Q6PIU2 408 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 CCDC149Q6ZUS6 474 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 ACAD11Q709F0 780 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 LSMEM2Q8N112 164 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 FIBCD1Q8N539 461 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 EFHBQ8N7U6 833 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 DCAF4L2Q8NA75 395 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 MDGA1Q8NFP4 955 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 CNDP1Q96KN2 507 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 CYP4F12Q9HCS2 524 aa17.08■□□□□ 0.32
PTPRO-209ENST00000543886 VPS51Q9UID3 782 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms