RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 NKX3-2P78367 333 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 LRRC23Q53EV4 343 aaPredicted RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 AFMIDQ63HM1 303 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 KDELC1Q6UW63 502 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 HACD2Q6Y1H2 254 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 GALNT7Q86SF2 657 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 AMIGO2Q86SJ2 522 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 METTL23Q86XA0 190 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 ANKRD49Q8WVL7 239 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 SLCO4A1Q96BD0 722 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 HAUS8Q9BT25 410 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 SLC25A51Q9H1U9 297 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 OCEL1Q9H607 264 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 THEGQ9P2T0 379 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 IPO11Q9UI26 975 aaKnown RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 ST3GAL5Q9UNP4 418 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 NYNRINQ9P2P1 1898 aaKnown RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 E9PAM4 449 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 M0QZ92 97 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 TMCC1O94876 653 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 STAMBPO95630 424 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 ACADVLP49748 655 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 ATP4BP51164 291 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 C6orf10Q5SRN2 563 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 ARTNQ5T4W7 220 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 TAF2Q6P1X5 1199 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 C8orf82Q6P1X6 216 aaPredicted RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 LARP4Q71RC2 724 aaKnown RBP eCLIP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 CILP2Q8IUL8 1156 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 EZH1Q92800 747 aaPredicted RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 UHRF1Q96T88 793 aaPredicted RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 SPC25Q9HBM1 224 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 TMCO1Q9UM00 188 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 VWA7Q9Y334 891 aa16.64■□□□□ 0.25
KDM2B-216ENST00000543025 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
KDM2B-216ENST00000543025 UBFD1O14562 309 aaKnown RBP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 PENKP01210 267 aaPredicted RBP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 FGFR3P22607 806 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 YWHAQP27348 245 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 HOXC8P31273 242 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 STX1BP61266 288 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 CYTH1Q15438 398 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 MTX3Q5HYI7 312 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 GNASQ5JWF2 1037 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 CLEC6AQ6EIG7 209 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 CYP2R1Q6VVX0 501 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 OR9I1Q8NGQ6 314 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 OR13J1Q8NGT2 312 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 B4GALNT2Q8NHY0 566 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 CASP10Q92851 521 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 MPP6Q9NZW5 540 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 GIT1Q9Y2X7 761 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 RNF11Q9Y3C5 154 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 SUPT7LO94864 414 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 PAPSS2O95340 614 aaPredicted RBP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 SLC26A3P40879 764 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 MRPS6P82932 125 aaKnown RBP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 PURAQ00577 322 aaKnown RBP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 EML3Q32P44 896 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 PABPC1LQ4VXU2 614 aaKnown RBP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 PAN2Q504Q3 1202 aaKnown RBP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 ZNF678Q5SXM1 525 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 LAYNQ6UX15 382 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 CARM1Q86X55 608 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 SPNS2Q8IVW8 549 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 TSPAN14Q8NG11 270 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 ROPN1LQ96C74 230 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 L3HYPDHQ96EM0 354 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.25
KDM2B-216ENST00000543025 ALG9Q9H6U8 611 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 ATP13A1Q9HD20 1204 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 OSER1Q9NX31 292 aa16.63■□□□□ 0.25
KDM2B-216ENST00000543025 B3GAT3O94766 335 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 MOCS2O96007 188 aaPredicted RBP16.62■□□□□ 0.25
KDM2B-216ENST00000543025 SLC5A3P53794 718 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 MAP7D1Q3KQU3 841 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 IRAK1BP1Q5VVH5 260 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 LHX8Q68G74 356 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 AGMOQ6ZNB7 445 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 DHFR2Q86XF0 187 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 SNX31Q8N9S9 440 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 PPWD1Q96BP3 646 aaKnown RBP16.62■□□□□ 0.25
KDM2B-216ENST00000543025 C19orf60Q96EN9 201 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 IMP4Q96G21 291 aaKnown RBP16.62■□□□□ 0.25
KDM2B-216ENST00000543025 PKMYT1Q99640 499 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 MTF2Q9Y483 593 aaPredicted RBP16.62■□□□□ 0.25
KDM2B-216ENST00000543025 HS3ST4Q9Y661 456 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 SCN10AQ9Y5Y9 1956 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 ATP6AP2A0A1C7CYW4 349 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 ATP6AP2O75787 350 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 H6PDO95479 791 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 CYP11A1P05108 521 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 RENBPP51606 427 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 SLC7A2P52569 658 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 GPR158Q5T848 1215 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 KRT80Q6KB66 452 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 CYHR1Q6ZMK1 362 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms