RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 OR1E3Q8WZA6 343 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 TMEM159Q96B96 161 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 PDXPQ96GD0 296 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTPN6-219ENST00000542848 SEMA4CQ9C0C4 833 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 DHX35Q9H5Z1 703 aaKnown RBP11.91□□□□□ -0.5
PTPN6-219ENST00000542848 MYO6Q9UM54 1294 aa11.91□□□□□ -0.5
PTPN6-219ENST00000542848 PDE2AO00408 941 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 TRAFD1O14545 582 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 NVLO15381 856 aaKnown RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 EFSO43281 561 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 NOBOXO60393 691 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 RNF8O76064 485 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 PRKCGP05129 697 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 ERCC2P18074 760 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 PSMA2P25787 234 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 HCAR3P49019 387 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 ZFP36L1Q07352 338 aaKnown RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 IL10RBQ08334 325 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 CA9Q16790 459 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 CERCAMQ5T4B2 595 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 KCTD16Q68DU8 428 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 PLEKHA7Q6IQ23 1121 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 PNCKQ6P2M8 343 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 XKR5Q6UX68 686 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 RFX8Q6ZV50 586 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 APTXQ7Z2E3 356 aaKnown RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 PSTKQ8IV42 348 aaKnown RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 ARHGAP12Q8IWW6 846 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 ARFGAP1Q8N6T3 406 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 KCTD15Q96SI1 283 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 CINPQ9BW66 212 aaPredicted RBP11.9□□□□□ -0.5
PTPN6-219ENST00000542848 FOXP3Q9BZS1 431 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 SP110Q9HB58 689 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 FGF22Q9HCT0 170 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 GPATCH2LQ9NWQ4 482 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 KCTD5Q9NXV2 234 aa11.9□□□□□ -0.5
PTPN6-219ENST00000542848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.89□□□□□ -0.51
PTPN6-219ENST00000542848 A0A1W2PQ67 120 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 TMEM191CA6NGB0 347 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 DFFAO00273 331 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 NUDT21O43809 227 aaKnown RBP11.89□□□□□ -0.51
PTPN6-219ENST00000542848 JMJD7P0C870 316 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 GM2AP17900 193 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 SCNN1BP51168 640 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 AP1S1P61966 158 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 HLTFQ14527 1009 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTPN6-219ENST00000542848 C14orf28Q4W4Y0 310 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 TMCO4Q5TGY1 634 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 SPRED1Q7Z699 444 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 GAS2L3Q86XJ1 694 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 JAMLQ86YT9 394 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 LZTR1Q8N653 840 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 Q8N9G6 341 aaPredicted RBP11.89□□□□□ -0.51
PTPN6-219ENST00000542848 FNIP1Q8TF40 1166 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 ZNF599Q96NL3 588 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 PSKH2Q96QS6 385 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 BPIFA3Q9BQP9 254 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 SNRNP25Q9BV90 132 aaKnown RBP11.89□□□□□ -0.51
PTPN6-219ENST00000542848 TMEM168Q9H0V1 697 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 CYP4F12Q9HCS2 524 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 MRPL40Q9NQ50 206 aaKnown RBP11.89□□□□□ -0.51
PTPN6-219ENST00000542848 TAS2R14Q9NYV8 317 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 LRIT1Q9P2V4 623 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 PCSK1NQ9UHG2 260 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 LOXL2Q9Y4K0 774 aa11.89□□□□□ -0.51
PTPN6-219ENST00000542848 TLN1Q9Y490 2541 aaKnown RBP11.89□□□□□ -0.51
PTPN6-219ENST00000542848 PRPSAP2O60256 369 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 LIPCP11150 499 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 GZMAP12544 262 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 HGFP14210 728 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 MIPP30301 263 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
PTPN6-219ENST00000542848 TPM4P67936 248 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 LBRQ14739 615 aaKnown RBP11.88□□□□□ -0.51
PTPN6-219ENST00000542848 ACOX1Q15067 660 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 ANO6Q4KMQ2 910 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 PPP6R3Q5H9R7 873 aaPredicted RBP11.88□□□□□ -0.51
PTPN6-219ENST00000542848 SPECC1LQ69YQ0 1117 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 ARHGAP36Q6ZRI8 547 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 CYP4V2Q6ZWL3 525 aaPredicted RBP11.88□□□□□ -0.51
PTPN6-219ENST00000542848 USP53Q70EK8 1073 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 KIAA1524Q8TCG1 905 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 SGF29Q96ES7 293 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 COQ10AQ96MF6 247 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 PEBP4Q96S96 227 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 CMKLR1Q99788 373 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 LGR4Q9BXB1 951 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 B3GNT4Q9C0J1 378 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 HSD3B7Q9H2F3 369 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 DPEP2Q9H4A9 486 aa11.88□□□□□ -0.51
PTPN6-219ENST00000542848 WDR26Q9H7D7 661 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms