RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CNKSR3Q6P9H4 555 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 KYAT3Q6YP21 454 aaKnown RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CPNE9Q8IYJ1 553 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CLEC4FQ8N1N0 589 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CXorf38Q8TB03 319 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 DNAJB14Q8TBM8 379 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF398Q8TD17 642 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 COPS8Q99627 209 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SLC25A51Q9H1U9 297 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 RHOJQ9H4E5 214 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 MTG2Q9H4K7 406 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 WARS2Q9UGM6 360 aaKnown RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SCOCQ9UIL1 159 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SNX8Q9Y5X2 465 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 LRP5O75197 1615 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ADAMTS7Q9UKP4 1686 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 A8MUI8 341 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF623O75123 536 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CDK14O94921 469 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 FGF1P05230 155 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ATP6V1B1P15313 513 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 PTPN2P17706 415 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 EFNA1P20827 205 aaPredicted RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SLC1A2P43004 574 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 KLF1Q13351 362 aaPredicted RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SNX30Q5VWJ9 437 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ZMIZ2Q8NF64 920 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 STAG3L4Q8TBR4 150 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CNDP1Q96KN2 507 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CLDND1Q9NY35 253 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 RCOR3Q9P2K3 495 aaPredicted RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 OPTCQ9UBM4 332 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 PLLPQ9Y342 182 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SCN7AQ01118 1682 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 USP54Q70EL1 1684 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 TMEM247A6NEH6 219 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 RAD51BO15315 384 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ZBTB14O43829 449 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SMNDC1O75940 238 aaKnown RBP eCLIP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SIX3O95343 332 aaPredicted RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 EIF2S1P05198 315 aaKnown RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 EEF1DP29692 281 aaKnown RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 PSMD8P48556 350 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CLDN10P78369 228 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 GRM2Q14416 872 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 PARP15Q460N3 678 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 ARL13AQ5H913 290 aaPredicted RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 KIAA0319Q5VV43 1072 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 MCOLN3Q8TDD5 553 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CYGBQ8WWM9 190 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 PYCR2Q96C36 320 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 VPS50Q96JG6 964 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SMIM14Q96QK8 99 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SLC9A7Q96T83 725 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SH3GL2Q99962 352 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 YIPF3Q9GZM5 350 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 RHBGQ9H310 441 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 HCFC1R1Q9NWW0 138 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
TTC39C-203ENST00000540918 TAGLN3Q9UI15 199 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 GPSM3Q9Y4H4 160 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 INSL5Q9Y5Q6 135 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 CLUHO75153 1309 aa9.57□□□□□ -0.88
TTC39C-203ENST00000540918 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CCDC162PA2VCL2 907 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 NIPSNAP2O75323 286 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CHRNGP07510 517 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 THRAP10827 490 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 TPSB2P20231 275 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 IL10P22301 178 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 FGFR3P22607 806 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CTGFP29279 349 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 GGT5P36269 586 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 CCR10P46092 362 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 ARL4DP49703 201 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF135P52742 658 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 IRF8Q02556 426 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 TPSAB1Q15661 275 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 MPPE1Q53F39 396 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 LY6G5CQ5SRR4 150 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 KCTD13Q8WZ19 329 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 FAM162AQ96A26 154 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 SEMA6AQ9H2E6 1030 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 LNPEPQ9UIQ6 1025 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 N4BP2Q86UW6 1770 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 MGAT4DA6NG13 374 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 IFRD1O00458 451 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 EDF1O60869 148 aaKnown RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 ZNF682O95780 498 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 LMNAP02545 664 aaKnown RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 HGFP14210 728 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 GPC1P35052 558 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 YBEYP58557 167 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 PLOD1Q02809 727 aaPredicted RBP9.56□□□□□ -0.88
TTC39C-203ENST00000540918 STX5Q13190 355 aa9.56□□□□□ -0.88
TTC39C-203ENST00000540918 KPNB1Q14974 876 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms