RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 IMP4Q96G21 291 aaKnown RBP9.26□□□□□ -0.93
SNHG1-215ENST00000540904 HES6Q96HZ4 224 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 QKIQ96PU8 341 aaKnown RBP eCLIP9.26□□□□□ -0.93
SNHG1-215ENST00000540904 SMIM14Q96QK8 99 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 RBM15Q96T37 977 aaKnown RBP eCLIP9.26□□□□□ -0.93
SNHG1-215ENST00000540904 FAM118BQ9BPY3 351 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 TDRD1Q9BXT4 1180 aaKnown RBP9.26□□□□□ -0.93
SNHG1-215ENST00000540904 C10orf88Q9H8K7 445 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 GLOD4Q9HC38 313 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 PCDH9Q9HC56 1237 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 DNAJC28Q9NX36 388 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 KLHL8Q9P2G9 620 aaPredicted RBP9.26□□□□□ -0.93
SNHG1-215ENST00000540904 BTBD3Q9Y2F9 522 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 PCDHGB2Q9Y5G2 931 aa9.26□□□□□ -0.93
SNHG1-215ENST00000540904 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 ADAMTS9Q9P2N4 1935 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PI4KAP42356 2102 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 SPTY2D1-AS1A0A0U1RR47 76 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 SPAARA0A1B0GVQ0 90 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 MED19A0JLT2 244 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 CFAP69A5D8W1 941 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 GOLGA6L9A6NEM1 432 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 F5H423 210 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 YKT6O15498 198 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PCDHGA12O60330 932 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 HEXIM1O94992 359 aaKnown RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PRLP01236 227 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 CYP2A6P11509 494 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 LHCGRP22888 699 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 RBL1P28749 1068 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 EPHA8P29322 1005 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 HNF1BP35680 557 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 GRK6P43250 576 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 RXRGP48443 463 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 THOP1P52888 689 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 EIF3EP60228 445 aaKnown RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 SIM1P81133 766 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 BNIP3Q12983 259 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 XRCC4Q13426 336 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 FZD2Q14332 565 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PCSK7Q16549 785 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 INAVAQ3KP66 663 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 TPRG1LQ5T0D9 272 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 DARS2Q6PI48 645 aaKnown RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 DBX2Q6ZNG2 339 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 ZNF662Q6ZS27 426 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PID1Q7Z2X4 250 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 HSD11B1LQ7Z5J1 315 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 SPATA22Q8NHS9 363 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 RHBDD1Q8TEB9 315 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 SAP25Q8TEE9 199 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 HTR3CQ8WXA8 447 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 TEKT5Q96M29 485 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 ALS2CR12Q96Q35 445 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 MCCC1Q96RQ3 725 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 TMEM121BQ9BXQ6 578 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-215ENST00000540904 ADGRE3Q9BY15 652 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 SLC25A51Q9H1U9 297 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 CAAP1Q9H8G2 361 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 GPR27Q9NS67 375 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 UBP1Q9NZI7 540 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PCOLCE2Q9UKZ9 415 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PPP2R2CQ9Y2T4 447 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 PPIL1Q9Y3C6 166 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 OR1A2Q9Y585 309 aa9.25□□□□□ -0.93
SNHG1-215ENST00000540904 A0A0J9YYE9 177 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 GOLGA6CA6NDK9 693 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 GOLGA6BA6NDN3 693 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 CAPN8A6NHC0 703 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 KCNN4O15554 427 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 CBFA2T3O75081 653 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 PMPCBO75439 489 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 MT-CYBP00156 380 aaPredicted RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 TRBC1P01850 177 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 GOLGA6DP0CG33 693 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 RBP3P10745 1247 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 GM2AP17900 193 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 NFKB1P19838 968 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 ETV3P41162 512 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 RPL26P61254 145 aaKnown RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 YPEL5P62699 121 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 PTK2BQ14289 1009 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 GALNT3Q14435 633 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 AGERQ15109 404 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 RPS6KA1Q15418 735 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 TRIP6Q15654 476 aaKnown RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 N4BP2L1Q5TBK1 243 aaPredicted RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 LRRC66Q68CR7 880 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 CRTC1Q6UUV9 634 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 Q6ZVL8 140 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 PARGQ86W56 976 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 CDKL3Q8IVW4 592 aaPredicted RBP9.24□□□□□ -0.93
SNHG1-215ENST00000540904 ZNF567Q8N184 647 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 EID2Q8N6I1 236 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 PLA2G15Q8NCC3 412 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 NUS1Q96E22 293 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 IFT43Q96FT9 208 aa9.24□□□□□ -0.93
SNHG1-215ENST00000540904 COQ10AQ96MF6 247 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms