RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 BCAS2O75934 225 aaPredicted RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 CDKN2BP42772 138 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 TXNL4AP83876 142 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 PFKPQ01813 784 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 NFATC3Q12968 1075 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 AGKQ53H12 422 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 SAMD4BQ5PRF9 694 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 OTUD3Q5T2D3 398 aaPredicted RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 DHRS4L2Q6PKH6 230 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 NPNTQ6UXI9 565 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 IGFN1Q86VF2 1251 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 TTC30BQ8N4P2 665 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 DNAAF3Q8N9W5 541 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 ZNF347Q96SE7 839 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 CGRRF1Q99675 332 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 PCDHAC1Q9H158 963 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 TASP1Q9H6P5 420 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 APOBEC3GQ9HC16 384 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 RAB23Q9ULC3 237 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 CHADO15335 359 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 PLIN3O60664 434 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 NADKO95544 446 aaPredicted RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 CASP2P42575 452 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 PRKAA2P54646 552 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 SMUG1Q53HV7 270 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 HORMAD1Q86X24 394 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 CHERPQ8IWX8 916 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 ACMSDQ8TDX5 336 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 KIF12Q96FN5 646 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 ELAC1Q9H777 363 aaKnown RBP8.72□□□□□ -1.01
DDB1-217ENST00000540166 CNTN3Q9P232 1028 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 AP4E1Q9UPM8 1137 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 SPEF1Q9Y4P9 236 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 HES2Q9Y543 173 aa8.72□□□□□ -1.01
DDB1-217ENST00000540166 BRWD1Q9NSI6 2320 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 ANKRD34BA5PLL1 514 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 CENPXA8MT69 81 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 CXorf49A8MYA2 514 aaPredicted RBP8.71□□□□□ -1.01
DDB1-217ENST00000540166 SLCO1B7G3V0H7 640 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 AREL1O15033 823 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 DHX15O43143 795 aaKnown RBP8.71□□□□□ -1.01
DDB1-217ENST00000540166 LYPLA2O95372 231 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 SEC24AO95486 1093 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 TOP3BO95985 862 aaKnown RBP8.71□□□□□ -1.01
DDB1-217ENST00000540166 C4BPAP04003 597 aaKnown RBP8.71□□□□□ -1.01
DDB1-217ENST00000540166 FYNP06241 537 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.01
DDB1-217ENST00000540166 ZNF362Q5T0B9 420 aaPredicted RBP8.71□□□□□ -1.01
DDB1-217ENST00000540166 BBS12Q6ZW61 710 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 ZNF276Q8N554 614 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 LZTR1Q8N653 840 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 ZNF781Q8N8C0 355 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 CCNYQ8ND76 341 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 UBA3Q8TBC4 463 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 AUTS2Q8WXX7 1259 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 CEP295NLQ96MC4 621 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 CITED4Q96RK1 184 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 CNOT11Q9UKZ1 510 aaKnown RBP8.71□□□□□ -1.01
DDB1-217ENST00000540166 BAG5Q9UL15 447 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 USP18Q9UMW8 372 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 V9GYQ6 96 aa8.71□□□□□ -1.01
DDB1-217ENST00000540166 SYNJ2BP-COX16A0A087WUM0 186 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 APOC4-APOC2K7ER74 178 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 KRT6AP02538 564 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 APOC2P02655 101 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 KRT6BP04259 564 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 S100A5P33763 92 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 NAMPTP43490 491 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 LSM3P62310 102 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 IL1RL1Q01638 556 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 MERTKQ12866 999 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 RALGDSQ12967 914 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 MMRN1Q13201 1228 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 PMS2P3Q13401 168 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 KRR1Q13601 381 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 SLC9B1Q4ZJI4 515 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 ZBTB41Q5SVQ8 909 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 SLC39A4Q6P5W5 647 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 IGDCC3Q8IVU1 814 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 CLIP4Q8N3C7 705 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 DCLK2Q8N568 766 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 SLC35B2Q8TB61 432 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 LRRC39Q96DD0 335 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 CLIP3Q96DZ5 547 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 PCYT2Q99447 389 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 DHRS4Q9BTZ2 278 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 NIFKQ9BYG3 293 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 CDHR5Q9HBB8 845 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 SNTG2Q9NY99 539 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 CCDC167Q9P0B6 97 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 COX16Q9P0S2 106 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 MRPS23Q9Y3D9 190 aaKnown RBP8.71□□□□□ -1.02
DDB1-217ENST00000540166 CPQQ9Y646 472 aa8.71□□□□□ -1.02
DDB1-217ENST00000540166 M0QX08 132 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms