RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 MFSD10Q14728 455 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 CLEC16AQ2KHT3 1053 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 KIZQ2M2Z5 673 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 ZNF699Q32M78 642 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 C6orf118Q5T5N4 469 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 SCARA3Q6AZY7 606 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 GDF6Q6KF10 455 aaPredicted RBP12.66□□□□□ -0.38
DDX55-206ENST00000539934 SLC9B2Q86UD5 537 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 PLEKHA8Q96JA3 519 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 NARFLQ9H6Q4 476 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 GLRX2Q9NS18 164 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 STX18Q9P2W9 335 aaKnown RBP12.66□□□□□ -0.38
DDX55-206ENST00000539934 NBNO60934 754 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 CDH16O75309 829 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 SNAP29O95721 258 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 ALBP02768 609 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 CALB1P05937 261 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 ALDH1A3P47895 512 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 DSG1Q02413 1049 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 AGAP7PQ5VUJ5 663 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 C1orf146Q5VVC0 180 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 ALG1LQ6GMV1 187 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 LIN54Q6MZP7 749 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 POTEHQ6S545 545 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 HFE2Q6ZVN8 426 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 ZSWIM9Q86XI8 627 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 HPS6Q86YV9 775 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 BBS7Q8IWZ6 715 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 ASZ1Q8WWH4 475 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 HPS1Q92902 700 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 HEXIM2Q96MH2 286 aaKnown RBP12.66□□□□□ -0.38
DDX55-206ENST00000539934 MCMBPQ9BTE3 642 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 NIF3L1Q9GZT8 377 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 DDX47Q9H0S4 455 aaKnown RBP12.66□□□□□ -0.38
DDX55-206ENST00000539934 RBM12Q9NTZ6 932 aaKnown RBP12.66□□□□□ -0.38
DDX55-206ENST00000539934 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.66□□□□□ -0.38
DDX55-206ENST00000539934 ZDHHC7Q9NXF8 308 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 CHORDC1Q9UHD1 332 aaPredicted RBP12.66□□□□□ -0.38
DDX55-206ENST00000539934 Q9Y3F1 56 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 THAP12O43422 761 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 SPOPO43791 374 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 MT-ND3P03897 115 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 IFNA16P05015 189 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 UNGP13051 313 aaPredicted RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 CD58P19256 250 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 PSEN2P49810 448 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 RNF144AP50876 292 aaPredicted RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 KYAT1Q16773 422 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 MZT2BQ6NZ67 158 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX55-206ENST00000539934 ZDHHC17Q8IUH5 632 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 TBC1D19Q8N5T2 526 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 ZNF564Q8TBZ8 553 aaPredicted RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 KBTBD7Q8WVZ9 684 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 GCOM2Q9BZD3 368 aaPredicted RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 PAIP1Q9H074 479 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 CNOT8Q9UFF9 292 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 TAF4O00268 1085 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 KPNA4O00629 521 aaPredicted RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 PCDH17O14917 1159 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 RNASEH1O60930 286 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 NDUFS6O75380 124 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 PSIP1O75475 530 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 CDK14O94921 469 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 GJB5O95377 273 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 GJB6O95452 261 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 IL6P05231 212 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 NFICP08651 508 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 ATP6V1B1P15313 513 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 NPR3P17342 541 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 FGFR4P22455 802 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 PSMA2P25787 234 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 NSFP46459 744 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 STARP49675 285 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 CYP4F8P98187 520 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 CDC42EP1Q00587 391 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 SELENBP1Q13228 472 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 STX3Q13277 289 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 MESDQ14696 234 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 GTDC1Q4AE62 458 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 KANK2Q63ZY3 851 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 C11orf63Q6NUN7 778 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 SCARA5Q6ZMJ2 495 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 CPA6Q8N4T0 437 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 GRPEL2Q8TAA5 225 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 FBXO30Q8TB52 745 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 AGR3Q8TD06 166 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 RNF139Q8WU17 664 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 TP53INP1Q96A56 240 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 TGS1Q96RS0 853 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 SLC29A1Q99808 456 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 FERMT1Q9BQL6 677 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 TMEM79Q9BSE2 394 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 OR2B2Q9GZK3 357 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 CNOT6Q9ULM6 557 aaKnown RBP12.65□□□□□ -0.38
DDX55-206ENST00000539934 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms