RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SRSF1Q07955 248 aaKnown RBP eCLIP15.06■□□□□ 0
USB1-203ENST00000539737 SPA17Q15506 151 aa15.06■□□□□ 0
USB1-203ENST00000539737 COLEC12Q5KU26 742 aa15.06■□□□□ 0
USB1-203ENST00000539737 ERMARDQ5T6L9 678 aa15.06■□□□□ 0
USB1-203ENST00000539737 USP53Q70EK8 1073 aa15.06■□□□□ 0
USB1-203ENST00000539737 RAB11FIP2Q7L804 512 aa15.06■□□□□ 0
USB1-203ENST00000539737 PMEPA1Q969W9 287 aa15.06■□□□□ 0
USB1-203ENST00000539737 EXOC2Q96KP1 924 aa15.06■□□□□ 0
USB1-203ENST00000539737 LENG8Q96PV6 779 aaPredicted RBP15.06■□□□□ 0
USB1-203ENST00000539737 SNRNP25Q9BV90 132 aaKnown RBP15.06■□□□□ 0
USB1-203ENST00000539737 DONSONQ9NYP3 566 aa15.06■□□□□ 0
USB1-203ENST00000539737 PCSK1NQ9UHG2 260 aa15.06■□□□□ 0
USB1-203ENST00000539737 NEU3Q9UQ49 428 aa15.06■□□□□ 0
USB1-203ENST00000539737 OR1A2Q9Y585 309 aa15.06■□□□□ 0
USB1-203ENST00000539737 HEMK1Q9Y5R4 338 aaPredicted RBP15.06■□□□□ 0
USB1-203ENST00000539737 CXorf51AA0A1B0GTR3 108 aa15.05■□□□□ -0
USB1-203ENST00000539737 D6RAR5 112 aa15.05■□□□□ -0
USB1-203ENST00000539737 TERTO14746 1132 aaKnown RBP15.05■□□□□ -0
USB1-203ENST00000539737 TPP1O14773 563 aa15.05■□□□□ -0
USB1-203ENST00000539737 AREL1O15033 823 aa15.05■□□□□ -0
USB1-203ENST00000539737 RAMP2O60895 175 aa15.05■□□□□ -0
USB1-203ENST00000539737 TCEA3O75764 348 aa15.05■□□□□ -0
USB1-203ENST00000539737 PIGNO95427 931 aa15.05■□□□□ -0
USB1-203ENST00000539737 LCA5LO95447 670 aa15.05■□□□□ -0
USB1-203ENST00000539737 MAN1A1P33908 653 aa15.05■□□□□ -0
USB1-203ENST00000539737 TPI1P60174 286 aa15.05■□□□□ -0
USB1-203ENST00000539737 CLCA4Q14CN2 919 aa15.05■□□□□ -0
USB1-203ENST00000539737 ZNF805Q5CZA5 627 aa15.05■□□□□ -0
USB1-203ENST00000539737 NLRP14Q86W24 1093 aa15.05■□□□□ -0
USB1-203ENST00000539737 PYROXD2Q8N2H3 581 aa15.05■□□□□ -0
USB1-203ENST00000539737 ARFGAP1Q8N6T3 406 aa15.05■□□□□ -0
USB1-203ENST00000539737 SPC24Q8NBT2 197 aa15.05■□□□□ -0
USB1-203ENST00000539737 PDXPQ96GD0 296 aa15.05■□□□□ -0
USB1-203ENST00000539737 PEBP4Q96S96 227 aa15.05■□□□□ -0
USB1-203ENST00000539737 SLC13A1Q9BZW2 595 aa15.05■□□□□ -0
USB1-203ENST00000539737 MAGEH1Q9H213 219 aa15.05■□□□□ -0
USB1-203ENST00000539737 DHX35Q9H5Z1 703 aaKnown RBP15.05■□□□□ -0
USB1-203ENST00000539737 CATSPERBQ9H7T0 1116 aa15.05■□□□□ -0
USB1-203ENST00000539737 TMEM248Q9NWD8 314 aa15.05■□□□□ -0
USB1-203ENST00000539737 LOXL2Q9Y4K0 774 aa15.05■□□□□ -0
USB1-203ENST00000539737 LRRK2Q5S007 2527 aa15.04■□□□□ -0
USB1-203ENST00000539737 ZSCAN5CA6NGD5 496 aaPredicted RBP15.04■□□□□ -0
USB1-203ENST00000539737 TSPAN6O43657 245 aa15.04■□□□□ -0
USB1-203ENST00000539737 CREB3O43889 395 aa15.04■□□□□ -0
USB1-203ENST00000539737 PROSCO94903 275 aa15.04■□□□□ -0
USB1-203ENST00000539737 TIMP2P16035 220 aa15.04■□□□□ -0
USB1-203ENST00000539737 EPHB2P29323 1055 aa15.04■□□□□ -0
USB1-203ENST00000539737 CSRP3P50461 194 aa15.04■□□□□ -0
USB1-203ENST00000539737 INHBCP55103 352 aa15.04■□□□□ -0
USB1-203ENST00000539737 GSDMDP57764 484 aa15.04■□□□□ -0
USB1-203ENST00000539737 PPARDQ03181 441 aa15.04■□□□□ -0
USB1-203ENST00000539737 RAD51Q06609 339 aa15.04■□□□□ -0
USB1-203ENST00000539737 TBR1Q16650 682 aa15.04■□□□□ -0
USB1-203ENST00000539737 HADHQ16836 314 aaKnown RBP15.04■□□□□ -0
USB1-203ENST00000539737 BOLA3Q53S33 107 aa15.04■□□□□ -0
USB1-203ENST00000539737 ENPP7Q6UWV6 458 aa15.04■□□□□ -0
USB1-203ENST00000539737 MACC1Q6ZN28 852 aa15.04■□□□□ -0
USB1-203ENST00000539737 TTC7BQ86TV6 843 aa15.04■□□□□ -0
USB1-203ENST00000539737 ZSCAN30Q86W11 494 aa15.04■□□□□ -0
USB1-203ENST00000539737 PTRH1Q86Y79 214 aaKnown RBP15.04■□□□□ -0
USB1-203ENST00000539737 RTL3Q8N8U3 475 aaKnown RBP15.04■□□□□ -0
USB1-203ENST00000539737 FAM174AQ8TBP5 190 aa15.04■□□□□ -0
USB1-203ENST00000539737 TEKT4Q8WW24 435 aa15.04■□□□□ -0
USB1-203ENST00000539737 ARHGEF2Q92974 986 aaKnown RBP15.04■□□□□ -0
USB1-203ENST00000539737 LIN37Q96GY3 246 aaPredicted RBP15.04■□□□□ -0
USB1-203ENST00000539737 BTBD6Q96KE9 485 aa15.04■□□□□ -0
USB1-203ENST00000539737 GFM1Q96RP9 751 aaKnown RBP15.04■□□□□ -0
USB1-203ENST00000539737 ARHGAP9Q9BRR9 750 aa15.04■□□□□ -0
USB1-203ENST00000539737 SUDS3Q9H7L9 328 aaPredicted RBP15.04■□□□□ -0
USB1-203ENST00000539737 MRPL40Q9NQ50 206 aaKnown RBP15.04■□□□□ -0
USB1-203ENST00000539737 GPATCH2LQ9NWQ4 482 aa15.04■□□□□ -0
USB1-203ENST00000539737 GPR34Q9UPC5 381 aa15.04■□□□□ -0
USB1-203ENST00000539737 DOLKQ9UPQ8 538 aa15.04■□□□□ -0
USB1-203ENST00000539737 PCDHGA4Q9Y5G9 962 aa15.04■□□□□ -0
USB1-203ENST00000539737 SDK2Q58EX2 2172 aa15.03■□□□□ -0
USB1-203ENST00000539737 SOWAHDA6NJG2 315 aa15.03■□□□□ -0
USB1-203ENST00000539737 WASH4PA8MWX3 477 aa15.03■□□□□ -0
USB1-203ENST00000539737 EEF2KO00418 725 aaKnown RBP15.03■□□□□ -0
USB1-203ENST00000539737 TM7SF2O76062 418 aa15.03■□□□□ -0
USB1-203ENST00000539737 MTA2O94776 668 aa15.03■□□□□ -0
USB1-203ENST00000539737 PCCBP05166 539 aa15.03■□□□□ -0
USB1-203ENST00000539737 ARHGAP25P42331 645 aa15.03■□□□□ -0
USB1-203ENST00000539737 MAGEA1P43355 309 aa15.03■□□□□ -0
USB1-203ENST00000539737 RPIAP49247 311 aa15.03■□□□□ -0
USB1-203ENST00000539737 MAPK10P53779 464 aa15.03■□□□□ -0
USB1-203ENST00000539737 SNRPD1P62314 119 aaKnown RBP15.03■□□□□ -0
USB1-203ENST00000539737 SLC25A11Q02978 314 aaKnown RBP15.03■□□□□ -0
USB1-203ENST00000539737 WSCD2Q2TBF2 565 aa15.03■□□□□ -0
USB1-203ENST00000539737 MYLK3Q32MK0 819 aa15.03■□□□□ -0
USB1-203ENST00000539737 ESRP1Q6NXG1 681 aaKnown RBP15.03■□□□□ -0
USB1-203ENST00000539737 GDPD4Q6W3E5 623 aa15.03■□□□□ -0
USB1-203ENST00000539737 CYP4V2Q6ZWL3 525 aaPredicted RBP15.03■□□□□ -0
USB1-203ENST00000539737 ARL10Q8N8L6 244 aa15.03■□□□□ -0
USB1-203ENST00000539737 PLA2G15Q8NCC3 412 aa15.03■□□□□ -0
USB1-203ENST00000539737 DENND6BQ8NEG7 585 aa15.03■□□□□ -0
USB1-203ENST00000539737 OR2AP1Q8NGE2 309 aa15.03■□□□□ -0
USB1-203ENST00000539737 CCL4L1Q8NHW4 92 aa15.03■□□□□ -0
USB1-203ENST00000539737 TPCN2Q8NHX9 752 aa15.03■□□□□ -0
USB1-203ENST00000539737 SLC35G2Q8TBE7 412 aa15.03■□□□□ -0
USB1-203ENST00000539737 CXorf40AQ8TE69 158 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms