RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ASB12Q8WXK4 309 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 MS4A14Q96JA4 679 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 LENG8Q96PV6 779 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-206ENST00000539417 TMEM121Q9BTD3 319 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 MLPHQ9BV36 600 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-206ENST00000539417 SMARCAL1Q9NZC9 954 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 TPX2Q9ULW0 747 aaKnown RBP15.8■□□□□ 0.12
RPAIN-206ENST00000539417 GOLGA6L9A6NEM1 432 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 TM4SF5O14894 197 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 MTSS1O43312 755 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 LIASO43766 372 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 CEP104O60308 925 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 RECQL5O94762 991 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-206ENST00000539417 SYPP08247 313 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 ELFN1P0C7U0 828 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 PIRTP0C851 137 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 THEGLP0DJG4 465 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 NUDT1P36639 197 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 CHRNA4P43681 627 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 IL9RQ01113 521 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 SNX1Q13596 522 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 TEAD4Q15561 434 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 OASLQ15646 514 aaKnown RBP15.79■□□□□ 0.12
RPAIN-206ENST00000539417 CDKN3Q16667 212 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 Q6ZSR6 202 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 MRGPRX2Q96LB1 330 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 COQ10AQ96MF6 247 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 FCRL5Q96RD9 977 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 RSPH14Q9UHP6 348 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 PNMA8BQ9ULN7 279 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-206ENST00000539417 BPTFQ12830 3046 aa15.79■□□□□ 0.12
RPAIN-206ENST00000539417 A0A1W2PQ67 120 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 CAPN8A6NHC0 703 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 FANCGO15287 622 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 LZTS3O60299 673 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 FGGP02679 453 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 C1SP09871 688 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 PSMB4P28070 264 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 LIMK1P53667 647 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 EPHB1P54762 984 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 WNT3AP56704 352 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 C21orf59P57076 290 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 PFN3P60673 137 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ARHGAP8P85298 464 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 PTSQ03393 145 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 LRRC66Q68CR7 880 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 TAB3Q8N5C8 712 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 GLIS1Q8NBF1 620 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 TTC13Q8NBP0 860 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 NETO1Q8TDF5 533 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 COG1Q8WTW3 980 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 EID2BQ96D98 161 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 KLHDC7BQ96G42 594 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 WDR24Q96S15 920 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 VAT1Q99536 393 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 GBA3Q9H227 469 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 GPR27Q9NS67 375 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 TRHDEQ9UKU6 1024 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 JRKLQ9Y4A0 524 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 HS3ST3A1Q9Y663 406 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 SPTBN4Q9H254 2564 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 SPEGQ15772 3267 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ANKRD66B4E2M5 251 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 K7ESM1 405 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 SLC30A4O14863 429 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 FOXD2O60548 495 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 CLDN7O95471 211 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 METTL18O95568 372 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 PCCBP05166 539 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ATXN1LP0C7T5 689 aaKnown RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 CD59P13987 128 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ETS1P14921 441 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ETV3P41162 512 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ATXN3P54252 364 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 CDK18Q07002 472 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ACOX1Q15067 660 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ZNF423Q2M1K9 1284 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ZNF542PQ5EBM4 170 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 FAXCQ5TGI0 409 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 KCTD16Q68DU8 428 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 KYAT3Q6YP21 454 aaKnown RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 Q6ZVL8 140 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 USP45Q70EL2 814 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 PTAR1Q7Z6K3 402 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 UBE2Q2Q8WVN8 375 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 SPATA13Q96N96 652 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ZDHHC5Q9C0B5 715 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 DNAAF2Q9NVR5 837 aaKnown RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 HAUS2Q9NVX0 235 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 DLL3Q9NYJ7 618 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 FAM153AQ9UHL3 310 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 CD84Q9UIB8 345 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 CDV3Q9UKY7 258 aaKnown RBP15.78■□□□□ 0.12
RPAIN-206ENST00000539417 SPO11Q9Y5K1 396 aa15.78■□□□□ 0.12
RPAIN-206ENST00000539417 ASCC3Q8N3C0 2202 aaKnown RBP15.77■□□□□ 0.12
RPAIN-206ENST00000539417 LOC285095A0A1B0GVY8 99 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 DCDC2BA2VCK2 349 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 CFAP69A5D8W1 941 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 C5orf60A6NFR6 353 aa15.77■□□□□ 0.11
RPAIN-206ENST00000539417 A6NNZ2 444 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms