RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 CTPS1P17812 591 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 LHCGRP22888 699 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 CLDN6P56747 220 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 NIPAL4Q0D2K0 466 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 NFATC4Q14934 902 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 ACOX1Q15067 660 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 TAZQ16635 292 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 FAM182AQ5T1J6 154 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 FAXCQ5TGI0 409 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 RFX6Q8HWS3 928 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 TMTC1Q8IUR5 882 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 PELI3Q8N2H9 469 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 CBARPQ8N350 705 aaPredicted RBP14.83□□□□□ -0.04
USP28-204ENST00000537642 FAM181AQ8N9Y4 354 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 BTN2A2Q8WVV5 523 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 SCRN2Q96FV2 425 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 APOLD1Q96LR9 279 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 TBATAQ96M53 351 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 OLFM3Q96PB7 478 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 SMIM14Q96QK8 99 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 IL12RB2Q99665 862 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 LRRC61Q9BV99 259 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 SPASTQ9UBP0 616 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 APOBEC3BQ9UH17 382 aaKnown RBP14.83□□□□□ -0.04
USP28-204ENST00000537642 SALL4Q9UJQ4 1053 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 U3KQA8 63 aa14.83□□□□□ -0.04
USP28-204ENST00000537642 ASXL3Q9C0F0 2248 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 TMEM8BA6NDV4 472 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 KCNK1O00180 336 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 GCATO75600 419 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 JCHAINP01591 159 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 CAPNS1P04632 268 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 ALPIP09923 528 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 CYP2A6P11509 494 aaPredicted RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 CDK4P11802 303 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 CKMT1AP12532 417 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 ZFXP17010 805 aaPredicted RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 CES1P23141 567 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 NFKBIAP25963 317 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 CDKN2BP42772 138 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 DYNLT1P63172 113 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 IFI35P80217 286 aaPredicted RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 DAB2P98082 770 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 PPARDQ03181 441 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 ZBTB17Q13105 803 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 ILKQ13418 452 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 C1orf61Q13536 156 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 ALG11Q2TAA5 492 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 DEFB133Q30KQ1 61 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 ODF2Q5BJF6 829 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 PRRT3Q5FWE3 981 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 ESRP1Q6NXG1 681 aaKnown RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 ENPP7Q6UWV6 458 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 RAD9BQ6WBX8 426 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 HSD11B1LQ7Z5J1 315 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 TSPAN33Q86UF1 283 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 CNTD1Q8N815 330 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 TPCN2Q8NHX9 752 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 TSACCQ96A04 125 aaPredicted RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 FUBP1Q96AE4 644 aaKnown RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 DUSP23Q9BVJ7 150 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 SLC13A1Q9BZW2 595 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 CLPBQ9H078 707 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 LUC7LQ9NQ29 371 aaKnown RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 CHKBQ9Y259 395 aa14.82□□□□□ -0.04
USP28-204ENST00000537642 REXO2Q9Y3B8 237 aaKnown RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 KMT2BQ9UMN6 2715 aaPredicted RBP14.82□□□□□ -0.04
USP28-204ENST00000537642 A0A0U1RQS6 177 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 TPP1O14773 563 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 PRLP01236 227 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 MMP2P08253 660 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 KRT10P13645 584 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 HTR1BP28222 390 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 HNF1BP35680 557 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 TRIM23P36406 574 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 ETV3P41162 512 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 MARCKSL1P49006 195 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 HK3P52790 923 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 KIAA1024LP59773 190 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 AP1B1Q10567 949 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 CAMK2BQ13554 666 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 PDK1Q15118 436 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 LLGL1Q15334 1064 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 DENND2CQ68D51 928 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 KCTD16Q68DU8 428 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 C11orf63Q6NUN7 778 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 PNCKQ6P2M8 343 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 SPOCD1Q6ZMY3 1216 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 USP45Q70EL2 814 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 B4GALNT4Q76KP1 1039 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 TMPRSS12Q86WS5 348 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 HID1Q8IV36 788 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 KATNAL2Q8IYT4 538 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 ZCCHC14Q8WYQ9 949 aaKnown RBP14.81□□□□□ -0.04
USP28-204ENST00000537642 NUS1Q96E22 293 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 DTD2Q96FN9 168 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 WDR92Q96MX6 357 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 TDRD1Q9BXT4 1180 aaKnown RBP14.81□□□□□ -0.04
USP28-204ENST00000537642 HAUS2Q9NVX0 235 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms