RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ZNF497Q6ZNH5 498 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 WDR63Q8IWG1 891 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.94□□□□□ -1.62
CCDC7-208ENST00000537047 TMEM57Q8N5G2 664 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 CEP70Q8NHQ1 597 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 FAM76AQ8TAV0 307 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 ABTB1Q969K4 478 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-208ENST00000537047 SDCCAG3Q96C92 435 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 ZNF583Q96ND8 569 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 F2RL3Q96RI0 385 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 KCNN2Q9H2S1 579 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 ESRP2Q9H6T0 727 aaKnown RBP4.94□□□□□ -1.62
CCDC7-208ENST00000537047 PLEKHA5Q9HAU0 1116 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 PLCB1Q9NQ66 1216 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 DAAM1Q9Y4D1 1078 aa4.94□□□□□ -1.62
CCDC7-208ENST00000537047 TP53BP1Q12888 1972 aaPredicted RBP4.94□□□□□ -1.62
CCDC7-208ENST00000537047 IGKV3D-20A0A0C4DH25 116 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 ANP32CO43423 234 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 CYC1P08574 325 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 SLC2A4P14672 509 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 DDIT3P35638 169 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 BLKP51451 505 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 ACTR2P61160 394 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 ITGADQ13349 1161 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 NEDD9Q14511 834 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 KCNT1Q5JUK3 1230 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 MTSS1LQ765P7 747 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 MOGAT3Q86VF5 341 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 SMYD2Q9NRG4 433 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 TMEM30AQ9NV96 361 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 FEM1BQ9UK73 627 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 PADI1Q9ULC6 663 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 GDAQ9Y2T3 454 aa4.93□□□□□ -1.62
CCDC7-208ENST00000537047 TAF1P21675 1872 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 LILRA5A6NI73 299 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 PMS2P5A8MQ11 134 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 PEX12O00623 359 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 PRSS1P07477 247 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 PTPN2P17706 415 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 S1PR1P21453 382 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 GPTP24298 496 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 GRIK3Q13003 919 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 CTF1Q16619 201 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 SLC36A4Q6YBV0 504 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 KRBA2Q6ZNG9 492 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 FAM160B2Q86V87 743 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 MYLK4Q86YV6 388 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-208ENST00000537047 SUGP1Q8IWZ8 645 aaKnown RBP4.92□□□□□ -1.62
CCDC7-208ENST00000537047 OR2AK2Q8NG84 335 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 ZNF524Q96C55 264 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 PCYT2Q99447 389 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 KIF17Q9P2E2 1029 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 RCOR1Q9UKL0 485 aa4.92□□□□□ -1.62
CCDC7-208ENST00000537047 FAF1Q9UNN5 650 aaPredicted RBP4.92□□□□□ -1.62
CCDC7-208ENST00000537047 RRP7AQ9Y3A4 280 aaKnown RBP4.92□□□□□ -1.62
CCDC7-208ENST00000537047 SH2D7A6NKC9 451 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-208ENST00000537047 EXTL3O43909 919 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 MYOD1P15172 320 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 CHATP28329 748 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 PITX1P78337 314 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-208ENST00000537047 NAA25Q14CX7 972 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 ZNF667Q5HYK9 610 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 RGMBQ6NW40 437 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 ZNF852Q6ZMS4 543 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 KMT5CQ86Y97 462 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 C1orf87Q8N0U7 546 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 AGBL3Q8NEM8 1001 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 STAMQ92783 540 aa4.91□□□□□ -1.62
CCDC7-208ENST00000537047 LTV1Q96GA3 475 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-208ENST00000537047 MKKSQ9NPJ1 570 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-208ENST00000537047 IFNL4K9M1U5 179 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 KLK10O43240 276 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 ZNF500O60304 480 aaPredicted RBP4.9□□□□□ -1.63
CCDC7-208ENST00000537047 MTA2O94776 668 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 PCNAP12004 261 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 ETFAP13804 333 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 NR1D1P20393 614 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
CCDC7-208ENST00000537047 ISL1P61371 349 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 YWHAZP63104 245 aaKnown RBP4.9□□□□□ -1.63
CCDC7-208ENST00000537047 SGO1Q5FBB7 561 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 FBXO46Q6PJ61 603 aaPredicted RBP4.9□□□□□ -1.63
CCDC7-208ENST00000537047 KCTD8Q6ZWB6 473 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 DSELQ8IZU8 1212 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 METTL27Q8N6F8 245 aaPredicted RBP4.9□□□□□ -1.63
CCDC7-208ENST00000537047 ANKRD9Q96BM1 317 aaPredicted RBP4.9□□□□□ -1.63
CCDC7-208ENST00000537047 CDCA5Q96FF9 252 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 BARHL1Q9BZE3 327 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 PCDH9Q9HC56 1237 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 SNTG1Q9NSN8 517 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 MCM9Q9NXL9 1143 aa4.9□□□□□ -1.63
CCDC7-208ENST00000537047 VWA3AA6NCI4 1184 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 PATE4P0C8F1 98 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 CORO1AP31146 461 aaKnown RBP4.89□□□□□ -1.63
CCDC7-208ENST00000537047 CHKAP35790 457 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 GPATCH4Q5T3I0 446 aaKnown RBP4.89□□□□□ -1.63
CCDC7-208ENST00000537047 LCTLQ6UWM7 567 aa4.89□□□□□ -1.63
CCDC7-208ENST00000537047 GPAT4Q86UL3 456 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms