RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 DCAF6Q58WW2 860 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 SGO1Q5FBB7 561 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 BMP2KLQ5H9B9 411 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 MTX3Q5HYI7 312 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 Q5PR19 223 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 MANEAQ5SRI9 462 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 ACSM2BQ68CK6 577 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 GPR139Q6DWJ6 353 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 TMEM199Q8N511 208 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 POC5Q8NA72 575 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 ENGASEQ8NFI3 743 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 OR14L1PQ8NHC6 308 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 LPAR1Q92633 364 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 SLITRK1Q96PX8 696 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 TRMOQ9BU70 441 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 TMPRSS5Q9H3S3 457 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 DDX4Q9NQI0 724 aaKnown RBP5.54□□□□□ -1.52
PRKDC-208ENST00000536710 SETD4Q9NVD3 440 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 HEY2Q9UBP5 337 aa5.54□□□□□ -1.52
PRKDC-208ENST00000536710 TMEM202A6NGA9 273 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 TPPPO94811 219 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 PGM3O95394 542 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 P2RX3P56373 397 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 TFAP4Q01664 338 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 RBMS2Q15434 407 aaKnown RBP5.53□□□□□ -1.52
PRKDC-208ENST00000536710 WASHC2DQ5SRD0 308 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 ZNF626Q68DY1 528 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 JADE1Q6IE81 842 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 ZNF280DQ6N043 979 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 SLC30A6Q6NXT4 461 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 PARM1Q6UWI2 310 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 CLEC17AQ6ZS10 378 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 SEPT14Q6ZU15 432 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 LINGO2Q7L985 606 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 PATL1Q86TB9 770 aaKnown RBP5.53□□□□□ -1.52
PRKDC-208ENST00000536710 NANOGP1Q8N7R0 232 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 TEX45Q8NA69 505 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 SCCPDHQ8NBX0 429 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 RRNAD1Q96FB5 475 aaKnown RBP5.53□□□□□ -1.52
PRKDC-208ENST00000536710 FAM110AQ9BQ89 295 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 TEX12Q9BXU0 123 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 ISCUQ9H1K1 167 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 NDST4Q9H3R1 872 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 TUBA8Q9NY65 449 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-208ENST00000536710 PTGFRNQ9P2B2 879 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 SRPRBQ9Y5M8 271 aaKnown RBP5.53□□□□□ -1.52
PRKDC-208ENST00000536710 HS3ST3B1Q9Y662 390 aa5.53□□□□□ -1.52
PRKDC-208ENST00000536710 C1orf226A1L170 272 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 MASP2O00187 686 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 ENTPD3O75355 529 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 GPC4O75487 556 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 NDUFB4O95168 129 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 SYF2O95926 243 aaKnown RBP5.52□□□□□ -1.53
PRKDC-208ENST00000536710 CHATP28329 748 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 PIGAP37287 484 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 NRIP1P48552 1158 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 LMAN1P49257 510 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 ENTPD1P49961 510 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 PMS2P54278 862 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 RRP1P56182 461 aaKnown RBP5.52□□□□□ -1.53
PRKDC-208ENST00000536710 PRPF4BQ13523 1007 aaKnown RBP5.52□□□□□ -1.53
PRKDC-208ENST00000536710 GPR18Q14330 331 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 NEDD9Q14511 834 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 PTGR1Q14914 329 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 ADIPOQQ15848 244 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 NTRK2Q16620 822 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 TMEM266Q2M3C6 531 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 C2orf68Q2NKX9 166 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 MMEL1Q495T6 779 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 CDONQ4KMG0 1287 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 MON1BQ7L1V2 547 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 CTU1Q7Z7A3 348 aaKnown RBP5.52□□□□□ -1.53
PRKDC-208ENST00000536710 WDR63Q8IWG1 891 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 MIGA1Q8NAN2 632 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 ARRDC2Q8TBH0 407 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 SLC41A2Q96JW4 573 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 APOLD1Q96LR9 279 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 PCGF1Q9BSM1 259 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 MSTO1Q9BUK6 570 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 CATSPERBQ9H7T0 1116 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 TMEM51Q9NW97 253 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 CPSF2Q9P2I0 782 aaKnown RBP5.52□□□□□ -1.53
PRKDC-208ENST00000536710 RCOR1Q9UKL0 485 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 PTRH2Q9Y3E5 179 aaKnown RBP5.52□□□□□ -1.53
PRKDC-208ENST00000536710 NFE2L3Q9Y4A8 694 aa5.52□□□□□ -1.53
PRKDC-208ENST00000536710 H0YGN5 161 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 ITM2AO43736 263 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 FGBP02675 491 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 CYP1A2P05177 515 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 CD58P19256 250 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 CD38P28907 300 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 THPOP40225 353 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 ME1P48163 572 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 SELENOVP59797 346 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 LAMB3Q13751 1172 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 DUSP6Q16828 381 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 KRT24Q2M2I5 525 aa5.51□□□□□ -1.53
PRKDC-208ENST00000536710 DCAF12L2Q5VW00 463 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms