RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 KCNN4O15554 427 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 TSPAN6O43657 245 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 LIASO43766 372 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 GJB3O75712 270 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 PRLRP16471 622 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 CXCR5P32302 372 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 ABL2P42684 1182 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 RPL26P61254 145 aaKnown RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 TRAF2Q12933 501 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 SIX1Q15475 284 aaPredicted RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 UGP2Q16851 508 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 LONRF2Q1L5Z9 754 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 ARMC12Q5T9G4 340 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 DRICH1Q6PGQ1 229 aaPredicted RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 B4GALNT4Q76KP1 1039 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 ZNF567Q8N184 647 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 MINDY1Q8N5J2 469 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 PAF1Q8N7H5 531 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 IMP4Q96G21 291 aaKnown RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 PPP1R2P1Q96PQ5 205 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 FAM118BQ9BPY3 351 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 C6orf106Q9H6K1 298 aaPredicted RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 HOMER3Q9NSC5 361 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 SLC6A14Q9UN76 642 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 RPL26L1Q9UNX3 145 aaKnown RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 FADS3Q9Y5Q0 445 aa12.75□□□□□ -0.37
DDB1-207ENST00000535967 URB1O60287 2271 aaKnown RBP12.75□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3DA0A087WVF3 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3IA0A087WXS9 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3EA0A087X179 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3KA0A087X1G2 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TTC24A2A3L6 582 aaPredicted RBP12.74□□□□□ -0.37
DDB1-207ENST00000535967 CTAGE9A4FU28 777 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3FA6NER0 549 aaPredicted RBP12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3LB9A6J9 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 PGRMC1O00264 195 aaKnown RBP12.74□□□□□ -0.37
DDB1-207ENST00000535967 LATO43561 262 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 FZD6O60353 706 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 OPHN1O60890 802 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 PGLSO95336 258 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 MMP2P08253 660 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3HP0C7X1 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 NFKB1P19838 968 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 CD86P42081 329 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 SKOR1P84550 965 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 NIPAL4Q0D2K0 466 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 OASLQ15646 514 aaKnown RBP12.74□□□□□ -0.37
DDB1-207ENST00000535967 CCNG2Q16589 344 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 DUOXA1Q1HG43 343 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 PAPD7Q5XG87 772 aaKnown RBP12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3GQ6DHY5 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3CQ6IPX1 549 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 RAB44Q7Z6P3 723 aaPredicted RBP12.74□□□□□ -0.37
DDB1-207ENST00000535967 TTC7BQ86TV6 843 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 ZSWIM9Q86XI8 627 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TBC1D3Q8IZP1 549 aaPredicted RBP12.74□□□□□ -0.37
DDB1-207ENST00000535967 NDUFAF2Q8N183 169 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 ACTRT1Q8TDG2 376 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 ATG4AQ8WYN0 398 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 DNASE2BQ8WZ79 361 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 TADA1Q96BN2 335 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 BIRC7Q96CA5 298 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 RTP4Q96DX8 246 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 NSMCE3Q96MG7 304 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 SPATA13Q96N96 652 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 WDR24Q96S15 920 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 GBA3Q9H227 469 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 USP29Q9HBJ7 922 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 SUSD2Q9UGT4 822 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 RSPH14Q9UHP6 348 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 DNPEPQ9ULA0 475 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 DMTF1Q9Y222 760 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 PCDHGC4Q9Y5F7 938 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 RAI2Q9Y5P3 530 aa12.74□□□□□ -0.37
DDB1-207ENST00000535967 FAM221BA6H8Z2 402 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 C5orf60A6NFR6 353 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 FAM47DPA6NHR8 397 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 SPINT1O43278 529 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 RNGTTO60942 597 aaKnown RBP12.73□□□□□ -0.37
DDB1-207ENST00000535967 FSBPO95073 299 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 IGHV4-34P06331 123 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 ITGAVP06756 1048 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 TIMP2P16035 220 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 STIP1P31948 543 aaKnown RBP12.73□□□□□ -0.37
DDB1-207ENST00000535967 CD68P34810 354 aaPredicted RBP12.73□□□□□ -0.37
DDB1-207ENST00000535967 MMP12P39900 470 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 GRIA4P48058 902 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 ATXN3P54252 364 aaPredicted RBP12.73□□□□□ -0.37
DDB1-207ENST00000535967 PPP2CBP62714 309 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 RPS21P63220 83 aaKnown RBP12.73□□□□□ -0.37
DDB1-207ENST00000535967 PPP2CAP67775 309 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 TMEM259Q4ZIN3 620 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 SETMARQ53H47 684 aaPredicted RBP12.73□□□□□ -0.37
DDB1-207ENST00000535967 ANKRD20A2Q5SQ80 823 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 ANKRD20A1Q5TYW2 823 aa12.73□□□□□ -0.37
DDB1-207ENST00000535967 ANKRD20A3Q5VUR7 823 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms