RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 FAM76AQ8TAV0 307 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 SH3KBP1Q96B97 665 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 MXRA8Q9BRK3 442 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 PCGF6Q9BYE7 350 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 MROH8Q9H579 483 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 SMYD2Q9NRG4 433 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 KIF17Q9P2E2 1029 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 SUFUQ9UMX1 484 aa4.45□□□□□ -1.7
VBP1-203ENST00000535916 RRP7AQ9Y3A4 280 aaKnown RBP4.45□□□□□ -1.7
VBP1-203ENST00000535916 IGKV3D-15A0A087WSY6 115 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 PLIN1O60240 522 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 PRSS1P07477 247 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 SLC2A4P14672 509 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 ITGA2P17301 1181 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 CD58P19256 250 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 ALDH4A1P30038 563 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 ITGADQ13349 1161 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 POSTNQ15063 836 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 CTF1Q16619 201 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 KCNT1Q5JUK3 1230 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 ZNF772Q68DY9 489 aaPredicted RBP4.44□□□□□ -1.7
VBP1-203ENST00000535916 LRRC8EQ6NSJ5 796 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 ANKRD54Q6NXT1 300 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.44□□□□□ -1.7
VBP1-203ENST00000535916 VPS37AQ8NEZ2 397 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 DUSP19Q8WTR2 217 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 NUF2Q9BZD4 464 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 PCDH9Q9HC56 1237 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 DDX4Q9NQI0 724 aaKnown RBP4.44□□□□□ -1.7
VBP1-203ENST00000535916 MCM9Q9NXL9 1143 aa4.44□□□□□ -1.7
VBP1-203ENST00000535916 B9A039 149 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 PEX12O00623 359 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 EIF2S3P41091 472 aaKnown RBP4.43□□□□□ -1.7
VBP1-203ENST00000535916 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
VBP1-203ENST00000535916 PMP22Q01453 160 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 CHRNDQ07001 517 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 TUBB8Q3ZCM7 444 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 STXBP5Q5T5C0 1151 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 CCDC174Q6PII3 467 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 MTSS1LQ765P7 747 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 WDR63Q8IWG1 891 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 DSELQ8IZU8 1212 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 SCCPDHQ8NBX0 429 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 AGBL3Q8NEM8 1001 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 ABTB1Q969K4 478 aaPredicted RBP4.43□□□□□ -1.7
VBP1-203ENST00000535916 ZNF583Q96ND8 569 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 F2RL3Q96RI0 385 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 LITAFQ99732 161 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 BARHL1Q9BZE3 327 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 ZNF700Q9H0M5 742 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 ESRP2Q9H6T0 727 aaKnown RBP4.43□□□□□ -1.7
VBP1-203ENST00000535916 CTNNAL1Q9UBT7 734 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 FEM1BQ9UK73 627 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 DAAM1Q9Y4D1 1078 aa4.43□□□□□ -1.7
VBP1-203ENST00000535916 IGKV3D-20A0A0C4DH25 116 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 SH2D7A6NKC9 451 aaPredicted RBP4.42□□□□□ -1.7
VBP1-203ENST00000535916 PMS2P5A8MQ11 134 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 G6PDP11413 515 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 S1PR1P21453 382 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 NAA25Q14CX7 972 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 RGMBQ6NW40 437 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 FAM160B2Q86V87 743 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 MOGAT3Q86VF5 341 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 KMT5CQ86Y97 462 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 CDCA5Q96FF9 252 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 RASSF1Q9NS23 344 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 TMEM30AQ9NV96 361 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 RCOR1Q9UKL0 485 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 CARD8Q9Y2G2 431 aa4.42□□□□□ -1.7
VBP1-203ENST00000535916 TP53BP1Q12888 1972 aaPredicted RBP4.42□□□□□ -1.7
VBP1-203ENST00000535916 TAF1P21675 1872 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 AKR1B15C9JRZ8 316 aaPredicted RBP4.41□□□□□ -1.7
VBP1-203ENST00000535916 RNF224P0DH78 156 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 ETFAP13804 333 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 USP8P40818 1118 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 CLCNKAP51800 687 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 PRKG1Q13976 671 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 EIF2S3LQ2VIR3 472 aaKnown RBP4.41□□□□□ -1.7
VBP1-203ENST00000535916 ARHGAP17Q68EM7 881 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 SLC36A4Q6YBV0 504 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 ZNF34Q8IZ26 560 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 C1orf87Q8N0U7 546 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 TRAPPC12Q8WVT3 735 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 ZNF570Q96NI8 536 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 FAM167BQ9BTA0 163 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 PAGR1Q9BTK6 254 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 ALKBH4Q9NXW9 302 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 PADI1Q9ULC6 663 aa4.41□□□□□ -1.7
VBP1-203ENST00000535916 VWA3AA6NCI4 1184 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 KLK10O43240 276 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 CYC1P08574 325 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 HSD17B4P51659 736 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 ZNF667Q5HYK9 610 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 ZNF852Q6ZMS4 543 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 KCTD8Q6ZWB6 473 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 MAGEC3Q8TD91 643 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 PPM1EQ8WY54 764 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 FBXL8Q96CD0 374 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 SIN3AQ96ST3 1273 aa4.4□□□□□ -1.71
VBP1-203ENST00000535916 CD180Q99467 661 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms