RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 COQ6Q9Y2Z9 468 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 AAR2Q9Y312 384 aaKnown RBP12.1□□□□□ -0.47
CHD4-203ENST00000535717 PLXNA2O75051 1894 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 LRRK1Q38SD2 2015 aa12.1□□□□□ -0.47
CHD4-203ENST00000535717 GOLGA6L10A0A0M3HER8 536 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 A0A1B0GTW7 788 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 PATE3B3GLJ2 98 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 PRAMEF26H0Y7S4 382 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 RAD51BO15315 384 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 BCAT2O15382 392 aaPredicted RBP12.09□□□□□ -0.47
CHD4-203ENST00000535717 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
CHD4-203ENST00000535717 TM7SF2O76062 418 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
CHD4-203ENST00000535717 AGTP01019 485 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 ELFN1P0C7U0 828 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 PIRTP0C851 137 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 GNSP15586 552 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 GM2AP17900 193 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 TGM1P22735 817 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 NFKBIAP25963 317 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 CHRNA4P43681 627 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 SPEM2Q0P670 501 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 OLIG2Q13516 323 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 SPARCL1Q14515 664 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 SLC1A5Q15758 541 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 CDKN3Q16667 212 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 DUOXA1Q1HG43 343 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 SIRPB2Q5JXA9 342 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 LRRC66Q68CR7 880 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 KCTD11Q693B1 232 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 NAPEPLDQ6IQ20 393 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 CCDC70Q6NSX1 233 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 CCDC137Q6PK04 289 aaKnown RBP12.09□□□□□ -0.47
CHD4-203ENST00000535717 RANBP10Q6VN20 620 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 SLC25A41Q8N5S1 370 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 ASB12Q8WXK4 309 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 COQ10AQ96MF6 247 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 PPP1R2P1Q96PQ5 205 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 LENG8Q96PV6 779 aaPredicted RBP12.09□□□□□ -0.47
CHD4-203ENST00000535717 LYSMD1Q96S90 227 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 KLF6Q99612 283 aaPredicted RBP12.09□□□□□ -0.47
CHD4-203ENST00000535717 MYOCQ99972 504 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 FSD1LQ9BXM9 530 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 ETNK1Q9HBU6 452 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 FZD3Q9NPG1 666 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 PAK5Q9P286 719 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 RNF14Q9UBS8 474 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 SUSD2Q9UGT4 822 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 CA5BQ9Y2D0 317 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
CHD4-203ENST00000535717 PI4KAP42356 2102 aa12.08□□□□□ -0.47
CHD4-203ENST00000535717 CACNA1EQ15878 2313 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 PRR5-ARHGAP8B1AHC4 643 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 LZTS3O60299 673 aaPredicted RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 GFRA3O60609 400 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 LRP3O75074 770 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 USP12O75317 370 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 RECQL5O94762 991 aaPredicted RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 CLDN7O95471 211 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 WNT1P04628 370 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 CFIP05156 583 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 ZNF806P0C7X5 589 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 HNRNPA2B1P22626 353 aaKnown RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 AKT2P31751 481 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 ACTN2P35609 894 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 FDFT1P37268 417 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 PAFAH1B1P43034 410 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 TNNT3P45378 269 aaPredicted RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 FNTAP49354 379 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 CSNK1EP49674 416 aaKnown RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 AFF3P51826 1226 aaKnown RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 CLDN2P57739 230 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 RACK1P63244 317 aaKnown RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 LMNB2Q03252 620 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 PTSQ03393 145 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 ARHGEF7Q14155 803 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 ACOX1Q15067 660 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 AGERQ15109 404 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 SF3A2Q15428 464 aaKnown RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 TRIM61Q5EBN2 209 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 DENND2CQ68D51 928 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 TCEAL6Q6IPX3 200 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 SLC23A3Q6PIS1 610 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 LAYNQ6UX15 382 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 RABEPKQ7Z6M1 372 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
CHD4-203ENST00000535717 TMEM145Q8NBT3 493 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 CEP76Q8TAP6 659 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 TCEAL3Q969E4 200 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 CENPTQ96BT3 561 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 FAM122AQ96E09 287 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 TBL1YQ9BQ87 522 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 HINFPQ9BQA5 517 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 APOL2Q9BQE5 337 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 DDX47Q9H0S4 455 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms