RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PYGLP06737 847 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 TPM3P06753 285 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 PNLIPP16233 465 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 PCK1P35558 622 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 CDH6P55285 790 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 C14orf28Q4W4Y0 310 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 TPRG1LQ5T0D9 272 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 CCDC122Q5T0U0 273 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 PHF19Q5T6S3 580 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 ARMC12Q5T9G4 340 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 MARC1Q5VT66 337 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 USP53Q70EK8 1073 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 DPPA4Q7L190 304 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 Q8N9G6 341 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 IQCDQ96DY2 449 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 PSKH2Q96QS6 385 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 CCNL2Q96S94 520 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 RBM15Q96T37 977 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 CLPBQ9H078 707 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 CARS2Q9HA77 564 aaKnown RBP13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 CPNE5Q9HCH3 593 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 ASCL3Q9NQ33 180 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 PISDQ9UG56 409 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 IP6K2Q9UHH9 426 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 DNPEPQ9ULA0 475 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 PHTF1Q9UMS5 762 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 HEMK1Q9Y5R4 338 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 MYLKQ15746 1914 aa13.29□□□□□ -0.28
CLSTN3-205ENST00000535452 A0A1W2PQC6 194 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 TCRBV5S1A1TA0A578 114 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 TMEM191CA6NGB0 347 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 A8MX80 341 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 GOLGA6L19H0YKK7 550 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 PRKCGP05129 697 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 HOXC4P09017 264 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 CCKBRP32239 447 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 MMP13P45452 471 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 ZNF165P49910 485 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 CCL7P80098 99 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 ODF2Q5BJF6 829 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 MANEAQ5SRI9 462 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 RAET1GQ6H3X3 334 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 TIGD7Q6NT04 549 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 PNCKQ6P2M8 343 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 LIPIQ6XZB0 460 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 IRF2BP2Q7Z5L9 587 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 PIM3Q86V86 326 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 LRRC49Q8IUZ0 686 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 PDXPQ96GD0 296 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 ZNF830Q96NB3 372 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 KCTD15Q96SI1 283 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 CDH19Q9H159 772 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 LRIT1Q9P2V4 623 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 PCDHGA7Q9Y5G6 932 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 SPEGQ15772 3267 aa13.28□□□□□ -0.28
CLSTN3-205ENST00000535452 DOCK9Q9BZ29 2069 aa13.27□□□□□ -0.28
CLSTN3-205ENST00000535452 PRSS38A1L453 326 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 MYO1FO00160 1098 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 PSMD11O00231 422 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 NUDT21O43809 227 aaKnown RBP13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 BUB1BO60566 1050 aaPredicted RBP13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 PRB1P04280 392 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 CES1P23141 567 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 CD82P27701 267 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 VIPR1P32241 457 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 MAN1A1P33908 653 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 GPR1P46091 355 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 OGDHQ02218 1023 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 CLPPQ16740 277 aaPredicted RBP13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 CERCAMQ5T4B2 595 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 ARTNQ5T4W7 220 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 AFMIDQ63HM1 303 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 SPECC1LQ69YQ0 1117 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 CLEC14AQ86T13 490 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 MAP7D3Q8IWC1 876 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 FUBP1Q96AE4 644 aaKnown RBP13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 ECHDC3Q96DC8 303 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 AHCYL2Q96HN2 611 aaKnown RBP13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 NUDCD1Q96RS6 583 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 FOXP3Q9BZS1 431 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 TAS2R14Q9NYV8 317 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 AIPL1Q9NZN9 384 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 LCMT1Q9UIC8 334 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 APPL1Q9UKG1 709 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 LOXL2Q9Y4K0 774 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 TTLL3Q9Y4R7 772 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 FREM2Q5SZK8 3169 aa13.27□□□□□ -0.29
CLSTN3-205ENST00000535452 CDRT15L2A8MXV6 281 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 NTN3O00634 580 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 LRCH4O75427 683 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 CPNE6O95741 557 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 CELA2BP08218 269 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 SFTPCP11686 197 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 ALDH4A1P30038 563 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms