RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 GSTK1Q9Y2Q3 226 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 DISP2A7MBM2 1401 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 NPEPPSL1A6NEC2 478 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 FAM155BO75949 473 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 ECDO95905 644 aaPredicted RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 SMAD3P84022 425 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 DUSP4Q13115 394 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 ESRP1Q6NXG1 681 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 SPESP1Q6UW49 350 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 VGLL2Q8N8G2 317 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 C2orf49Q9BVC5 232 aaPredicted RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 H3BMM5 538 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 PCCBP05166 539 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 GABRR2P28476 465 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 CPSF6Q16630 551 aaKnown RBP eCLIP12.66□□□□□ -0.38
SPG11-203ENST00000535302 LDLRAP1Q5SW96 308 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 FBXO42Q6P3S6 717 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 CEP68Q76N32 757 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 RNF31Q96EP0 1072 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 IL22Q9GZX6 179 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 POLE3Q9NRF9 147 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 PSMD13Q9UNM6 376 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 S100A9P06702 114 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 NR1D2Q14995 579 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 CHERPQ8IWX8 916 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 RNF157Q96PX1 679 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 UBIAD1Q9Y5Z9 338 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 MC4RP32245 332 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 GTF2BQ00403 316 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 IL18R1Q13478 541 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 FRG1Q14331 258 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 FAM182AQ5T1J6 154 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 PRMT9Q6P2P2 845 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 OTOP3Q7RTS5 596 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 C10orf107Q8IVU9 208 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 SUCOQ9UBS9 1254 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 PHF24Q9UPV7 400 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 RPLP2P05387 115 aaKnown RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 ATP4AP20648 1035 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 NR4A1P22736 598 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CERCAMQ5T4B2 595 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 ING5Q8WYH8 240 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 MCMBPQ9BTE3 642 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 ATP13A3Q9H7F0 1226 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 IMP3Q9NV31 184 aaKnown RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 RAB23Q9ULC3 237 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 A0A1W2PPM1 405 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CHADO15335 359 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 FGF10O15520 208 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 SEPT4O43236 478 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 MGRN1O60291 552 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 MYBL2P10244 700 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 MAN2A2P49641 1150 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 USP41Q3LFD5 358 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 LINGO4Q6UY18 593 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CIR1Q86X95 450 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 CNPY4Q8N129 248 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 TERB1Q8NA31 727 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 DGKBQ9Y6T7 804 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 SERPINA3P01011 423 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 EPHA3P29320 983 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 OR1D2P34982 312 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CBX3Q13185 183 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 KCNA10Q16322 511 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 RASSF6Q6ZTQ3 369 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 C8orf59Q8N0T1 100 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 ZNF655Q8N720 491 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 LINGO1Q96FE5 620 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 TBATAQ96M53 351 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CITED4Q96RK1 184 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 BRINP2Q9C0B6 783 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CACNG4Q9UBN1 327 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CHRM5P08912 532 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 ITPKAP23677 461 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 ITGB3BPQ13352 177 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 CMC1Q7Z7K0 106 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 STAG3L4Q8TBR4 150 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 KLRG2A4D1S0 409 aaPredicted RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 GNB5O14775 395 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CST1P01037 141 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 ALADP13716 330 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 PAGE2BQ5JRK9 111 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 RFWD3Q6PCD5 774 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 FAR1Q8WVX9 515 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
SPG11-203ENST00000535302 HDAC10Q969S8 669 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 CCDC115Q96NT0 180 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 ING3Q9NXR8 418 aa12.65□□□□□ -0.38
SPG11-203ENST00000535302 MATN4O95460 622 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 FCER2P06734 321 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 ITGB5P18084 799 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 EFNA1P20827 205 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms