RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TSNAXIP1Q2TAA8 658 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 IZUMO3Q5VZ72 239 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 RGS9BPQ6ZS82 235 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 PPIL6Q8IXY8 311 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 RYBPQ8N488 228 aaPredicted RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ZNF366Q8N895 744 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 NAT8LQ8N9F0 302 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TXNDC5Q8NBS9 432 aaKnown RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 CHST14Q8NCH0 376 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TMIEQ8NEW7 156 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 RPLP0P6Q8NHW5 317 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ZFAND2BQ8WV99 257 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 OR8D1Q8WZ84 308 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 MRGPRX2Q96LB1 330 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ZNF641Q96N77 438 aaPredicted RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 FAM129BQ96TA1 746 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 OSBPL1AQ9BXW6 950 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 FOXP3Q9BZS1 431 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 FOXQ1Q9C009 403 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ATP13A3Q9H7F0 1226 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 LRRC40Q9H9A6 602 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 LRRC4CQ9HCJ2 640 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ZDHHC4Q9NPG8 344 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 NKIRAS1Q9NYS0 192 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 MMP17Q9ULZ9 603 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 LOC285095A0A1B0GVY8 99 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 A0A1W2PQ67 120 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 A0A1W2PQF6 199 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 HTRA2O43464 458 aaPredicted RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 FZD6O60353 706 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ATG13O75143 517 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 DCTN3O75935 186 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 SNUPNO95149 360 aaKnown RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ACADSP16219 412 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 GNAZP19086 355 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ATP6V1C1P21283 382 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 CALB2P22676 271 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 CA4P22748 312 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ADRA1AP35348 466 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 WASP42768 502 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 RPS9P46781 194 aaKnown RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 BCL2L1Q07817 233 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 STARD3Q14849 445 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 RANBP10Q6VN20 620 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 DSG4Q86SJ6 1040 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TAB3Q8N5C8 712 aaPredicted RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 MCUQ8NE86 351 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 PJA1Q8NG27 643 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 HCAR2Q8TDS4 363 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 ECHDC3Q96DC8 303 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 FEM1CQ96JP0 617 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TRIB3Q96RU7 358 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 TDRD1Q9BXT4 1180 aaKnown RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 CPSF2Q9P2I0 782 aaKnown RBP12.37□□□□□ -0.43
SCARB1-204ENST00000535005 IL36AQ9UHA7 158 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 PPM1HQ9ULR3 514 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 SHOC2Q9UQ13 582 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 RAI2Q9Y5P3 530 aa12.37□□□□□ -0.43
SCARB1-204ENST00000535005 F5H423 210 aaPredicted RBP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 TRAFD1O14545 582 aaPredicted RBP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 BNIP3LO60238 219 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 SYNCRIPO60506 623 aaKnown RBP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 PMPCBO75439 489 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 PRNPP04156 253 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 APRTP07741 180 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 HOXB2P14652 356 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 SERPINA4P29622 427 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 RPL26P61254 145 aaKnown RBP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 IL9RQ01113 521 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 CDK18Q07002 472 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 TRAF2Q12933 501 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 CBLBQ13191 982 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 GDPD4Q6W3E5 623 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 LINC00523Q86TU6 105 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 RELL1Q8IUW5 271 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 EGFL6Q8IUX8 553 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 OR6K2Q8NGY2 324 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 OR2T3Q8NH03 318 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 CCDC77Q9BR77 488 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 RSPH9Q9H1X1 276 aaPredicted RBP12.36□□□□□ -0.43
SCARB1-204ENST00000535005 SUV39H2Q9H5I1 410 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 PPCSQ9HAB8 311 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 ARNT2Q9HBZ2 717 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 UBP1Q9NZI7 540 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 ANAPC5Q9UJX4 755 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 PCDHGC4Q9Y5F7 938 aa12.36□□□□□ -0.43
SCARB1-204ENST00000535005 TCRBV7S3A2A0A539 114 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 TSPAN11A1L157 253 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 PRLP01236 227 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 CTSLP07711 333 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 ALDH3A1P30838 453 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 GKP32189 559 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 STX2P32856 288 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms