RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	STRADB	Q9C0K7	418 aa		11.63	□□□□□ -0.55
CTNND1-238	ENST00000534647	GAN	Q9H2C0	597 aa		11.63	□□□□□ -0.55
CTNND1-238	ENST00000534647	SUV39H2	Q9H5I1	410 aa		11.63	□□□□□ -0.55
CTNND1-238	ENST00000534647	GULP1	Q9UBP9	304 aa		11.63	□□□□□ -0.55
CTNND1-238	ENST00000534647	LHX3	Q9UBR4	397 aa		11.63	□□□□□ -0.55
CTNND1-238	ENST00000534647	RABGEF1	Q9UJ41	708 aa		11.63	□□□□□ -0.55
CTNND1-238	ENST00000534647	GPR34	Q9UPC5	381 aa		11.63	□□□□□ -0.55
CTNND1-238	ENST00000534647	PIEZO2	Q9H5I5	2752 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	SIGLEC16	A6NMB1	481 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	RASA4B	C9J798	803 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	PES1	O00541	588 aa	Known RBP	11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	TNFRSF10C	O14798	259 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	RASA4	O43374	803 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	GJB6	O95452	261 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	CELA2B	P08218	269 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	TPM1	P09493	284 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	GLB1	P16278	677 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	EPHB2	P29323	1055 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	HTR7	P34969	479 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	SOX5	P35711	763 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	INHBC	P55103	352 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	CCL7	P80098	99 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	MTM1	Q13496	603 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	INPP5A	Q14642	412 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	KRT31	Q15323	416 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	CYTH1	Q15438	398 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	LRRC73	Q5JTD7	316 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	KIAA1614	Q5VZ46	1190 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	FOXR1	Q6PIV2	292 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	WDR59	Q6PJI9	974 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	B3GNT8	Q7Z7M8	397 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	DNAAF5	Q86Y56	855 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	PHF13	Q86YI8	300 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	HID1	Q8IV36	788 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	KY	Q8NBH2	561 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	C3orf20	Q8ND61	904 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	PCDH19	Q8TAB3	1148 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	SLC30A5	Q8TAD4	765 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	TSACC	Q96A04	125 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	CCDC74A	Q96AQ1	378 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	HMCES	Q96FZ2	354 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	ZNF830	Q96NB3	372 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	TUBGCP5	Q96RT8	1024 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	C11orf70	Q9BRQ4	267 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	WRAP53	Q9BUR4	548 aa	Known RBP	11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	KLC2	Q9H0B6	622 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	LRRN3	Q9H3W5	708 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	CLMP	Q9H6B4	373 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	CATSPERB	Q9H7T0	1116 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	TAB2	Q9NYJ8	693 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	DONSON	Q9NYP3	566 aa		11.62	□□□□□ -0.55
CTNND1-238	ENST00000534647	TCRBV5S1A1T	A0A578	114 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	INSIG1	O15503	277 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	FGF10	O15520	208 aa	Predicted RBP	11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	GFPT2	O94808	682 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	WISP1	O95388	367 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	TNF	P01375	233 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	RPLP0	P05388	317 aa	Known RBP	11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	CALB1	P05937	261 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	GPD1	P21695	349 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	XPA	P23025	273 aa	Predicted RBP	11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	TRIM23	P36406	574 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	ZNF143	P52747	638 aa	Predicted RBP	11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	KCNC4	Q03721	635 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	NR1I3	Q14994	352 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	LINC00303	Q3SY05	128 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	EFHC2	Q5JST6	749 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	SPECC1L	Q69YQ0	1117 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	ERAP2	Q6P179	960 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	BRICD5	Q6PL45	260 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	ENPP7	Q6UWV6	458 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	PYROXD2	Q8N2H3	581 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	EXD3	Q8N9H8	876 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	ALKBH8	Q96BT7	664 aa	Known RBP	11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	SGF29	Q96ES7	293 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	WDR92	Q96MX6	357 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	KCNK17	Q96T54	332 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	PCDHB18P	Q96TA0	734 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	SEMA3C	Q99985	751 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	VPS16	Q9H269	839 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	PDF	Q9HBH1	243 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	PCDH12	Q9NPG4	1184 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	ADAM22	Q9P0K1	906 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	KL	Q9UEF7	1012 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	FZD10	Q9ULW2	581 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	MAST4	O15021	2626 aa		11.61	□□□□□ -0.55
CTNND1-238	ENST00000534647	FAM170A	A1A519	330 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	LRRC10B	A6NIK2	292 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	EIF3CL	B5ME19	914 aa	Known RBP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	BUB1B	O60566	1050 aa	Predicted RBP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	PRAMEF11	O60813	436 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	LIPC	P11150	499 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	SFTPC	P11686	197 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	HSD3B2	P26439	372 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	MMP12	P39900	470 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	NSF	P46459	744 aa	Known RBP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	LIG3	P49916	1009 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	NDST2	P52849	883 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms