RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	CEP70	Q8NHQ1	597 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HMGB4	Q8WW32	186 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ASB10	Q8WXI3	467 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HTRA1	Q92743	480 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GOLGA1	Q92805	767 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MIB2	Q96AX9	1013 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZNF707	Q96C28	371 aa	Predicted RBP	4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RSPRY1	Q96DX4	576 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CFAP53	Q96M91	514 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SEMA3C	Q99985	751 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PARPBP	Q9NWS1	579 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NDUFAF4	Q9P032	175 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SLC13A4	Q9UKG4	626 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CDH7	Q9ULB5	785 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TESMIN	Q9Y4I5	508 aa		4.84	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GON4L	Q3T8J9	2241 aa		4.84	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PI4KA	P42356	2102 aa		4.84	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LRRK1	Q38SD2	2015 aa		4.84	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PCDH15	Q96QU1	1955 aa		4.84	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MAP1A	P78559	2803 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LOC100996750	A0A140TA64	210 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	WDR27	A2RRH5	827 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLC38A8	A6NNN8	435 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DDAH2	O95865	285 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FES	P07332	822 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	IL6R	P08887	468 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CNP	P09543	421 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FAM163B	P0C2L3	166 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TMEM225B	P0DP42	221 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SCG2	P13521	617 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CD19	P15391	556 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	BCKDHB	P21953	392 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MCM5	P33992	734 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GSTM5	P46439	218 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NR1H2	P55055	460 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FAM3B	P58499	235 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GUCY1B3	Q02153	619 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LTB	Q06643	244 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LPIN1	Q14693	890 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CYP1B1	Q16678	543 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	P3H1	Q32P28	736 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	USP39	Q53GS9	565 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RHOU	Q7L0Q8	258 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TMPRSS12	Q86WS5	348 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ARHGEF19	Q8IW93	802 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NAGS	Q8N159	534 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TMEM57	Q8N5G2	664 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TOR1AIP2	Q8NFQ8	470 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PIGO	Q8TEQ8	1089 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SETD7	Q8WTS6	366 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KCNE4	Q8WWG9	221 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CPT1B	Q92523	772 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	C8orf49	Q96NF6	230 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZNF558	Q96NG5	402 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLC26A6	Q9BXS9	759 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KRTAP4-6	Q9BYQ5	205 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KRTAP3-1	Q9BYR8	98 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PLA2G2F	Q9BZM2	168 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZBP1	Q9H171	429 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLC25A18	Q9H1K4	315 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SPG21	Q9NZD8	308 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FBXO40	Q9UH90	709 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NFU1	Q9UMS0	254 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLC8A2	Q9UPR5	921 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TMEM98	Q9Y2Y6	226 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DERA	Q9Y315	318 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PRRC2C	Q9Y520	2896 aa	Known RBP	4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DLG5	Q8TDM6	1919 aa		4.83	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RYR1	P21817	5038 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442		A8MVJ9	347 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442		K7ESM1	405 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PMPCB	O75439	489 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GJB3	O75712	270 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MBD4	O95243	580 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LARGE1	O95461	756 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	C1S	P09871	688 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZNF286B	P0CG31	522 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	EGR2	P11161	476 aa	Predicted RBP	4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ATP1A3	P13637	1013 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KLRC2	P26717	231 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GK	P32189	559 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HNF1B	P35680	557 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DEUP1	Q05D60	604 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TRPC3	Q13507	836 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CCDC57	Q2TAC2	916 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CERKL	Q49MI3	558 aa	Predicted RBP	4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TIGD2	Q4W5G0	525 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DGAT2L7P	Q6IED9	249 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	C1orf122	Q6ZSJ8	110 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TIPARP	Q7Z3E1	657 aa	Known RBP	4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PCGF5	Q86SE9	256 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RAB11FIP4	Q86YS3	637 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DHX40	Q8IX18	779 aa	Known RBP	4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PALM2	Q8IXS6	379 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	VPS52	Q8N1B4	723 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.82	□□□□□ -1.64

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