RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ZC3H18Q86VM9 953 aaKnown RBP20.52■□□□□ 0.87
CCS-208ENST00000533244 COQ10AQ96MF6 247 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 AGAP3Q96P47 875 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 SLC25A51Q9H1U9 297 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 SEPT10Q9P0V9 454 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 RPL26L1Q9UNX3 145 aaKnown RBP20.52■□□□□ 0.87
CCS-208ENST00000533244 CHKBQ9Y259 395 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 BTBD3Q9Y2F9 522 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 A0A0J9YYE9 177 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 MED19A0JLT2 244 aaPredicted RBP20.51■□□□□ 0.87
CCS-208ENST00000533244 PSMD11O00231 422 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 LZTS3O60299 673 aaPredicted RBP20.51■□□□□ 0.87
CCS-208ENST00000533244 RECQL5O94762 991 aaPredicted RBP20.51■□□□□ 0.87
CCS-208ENST00000533244 TRBC1P01850 177 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 CYP2A6P11509 494 aaPredicted RBP20.51■□□□□ 0.87
CCS-208ENST00000533244 OTUD4Q01804 1114 aaKnown RBP20.51■□□□□ 0.87
CCS-208ENST00000533244 FZD2Q14332 565 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 PTPRRQ15256 657 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 ACTL9Q8TC94 416 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 VAT1Q99536 393 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 GLOD4Q9HC38 313 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 PCDH9Q9HC56 1237 aa20.51■□□□□ 0.87
CCS-208ENST00000533244 A8MX80 341 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 NRDCO43847 1150 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 TJP3O95049 919 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 ALPIP09923 528 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 CD68P34810 354 aaPredicted RBP20.5■□□□□ 0.87
CCS-208ENST00000533244 GRK6P43250 576 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 FOXK2Q01167 660 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 KLF1Q13351 362 aaPredicted RBP20.5■□□□□ 0.87
CCS-208ENST00000533244 ZNF211Q13398 564 aaPredicted RBP20.5■□□□□ 0.87
CCS-208ENST00000533244 GLRX5Q86SX6 157 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 NDUFAF2Q8N183 169 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 HTR3CQ8WXA8 447 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 TRIB3Q96RU7 358 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 LYSMD1Q96S90 227 aa20.5■□□□□ 0.87
CCS-208ENST00000533244 RBM15Q96T37 977 aaKnown RBP eCLIP20.5■□□□□ 0.875e-7■■■■□ 23.6
CCS-208ENST00000533244 COL5A1P20908 1838 aaPredicted RBP20.5■□□□□ 0.87
CCS-208ENST00000533244 CAPN8A6NHC0 703 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 ADRB1P08588 477 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 CTPS1P17812 591 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 HNF1BP35680 557 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 BNIP3Q12983 259 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 MTM1Q13496 603 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 PDE1CQ14123 709 aaPredicted RBP20.49■□□□□ 0.87
CCS-208ENST00000533244 N4BP2L1Q5TBK1 243 aaPredicted RBP20.49■□□□□ 0.87
CCS-208ENST00000533244 TSPAN33Q86UF1 283 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 PARGQ86W56 976 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 GATAD2AQ86YP4 633 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 SETD7Q8WTS6 366 aaKnown RBP20.49■□□□□ 0.87
CCS-208ENST00000533244 SMIM14Q96QK8 99 aa20.49■□□□□ 0.87
CCS-208ENST00000533244 QPCTQ16769 361 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 INAVAQ3KP66 663 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 CCDC181Q5TID7 509 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 CRTC1Q6UUV9 634 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 HSD11B1LQ7Z5J1 315 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 ZNF567Q8N184 647 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 PLA2G15Q8NCC3 412 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 LPCAT1Q8NF37 534 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 RHBDD1Q8TEB9 315 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 DTD2Q96FN9 168 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 LZTFL1Q9NQ48 299 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 KCTD5Q9NXV2 234 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 DNPEPQ9ULA0 475 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 PPP2R2CQ9Y2T4 447 aa20.48■□□□□ 0.87
CCS-208ENST00000533244 ARID1BQ8NFD5 2236 aaPredicted RBP20.47■□□□□ 0.87
CCS-208ENST00000533244 ANKRD66B4E2M5 251 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 CSF2P04141 144 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 ITGAVP06756 1048 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 NME1P15531 152 aaKnown RBP20.47■□□□□ 0.87
CCS-208ENST00000533244 ZNF30P17039 623 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 KCNA4P22459 653 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 RBL1P28749 1068 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 EPHB1P54762 984 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 EIF2B5Q13144 721 aaKnown RBP20.47■□□□□ 0.87
CCS-208ENST00000533244 INPP5AQ14642 412 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 ACOX1Q15067 660 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 TRIP6Q15654 476 aaKnown RBP20.47■□□□□ 0.87
CCS-208ENST00000533244 MEI1Q5TIA1 1274 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 LRRC66Q68CR7 880 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 ESRP1Q6NXG1 681 aaKnown RBP20.47■□□□□ 0.87
CCS-208ENST00000533244 MACC1Q6ZN28 852 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 TECPR1Q7Z6L1 1165 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 SPATA22Q8NHS9 363 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 PDLIM2Q96JY6 352 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 TRHDEQ9UKU6 1024 aa20.47■□□□□ 0.87
CCS-208ENST00000533244 SPAARA0A1B0GVQ0 90 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 H7C0C1 242 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 PIAS2O75928 621 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 MT-CYBP00156 380 aaPredicted RBP20.46■□□□□ 0.87
CCS-208ENST00000533244 PCCBP05166 539 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 RBP3P10745 1247 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 NFKB1P19838 968 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 DGKAP23743 735 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 TRIM23P36406 574 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 ATP5OP48047 213 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 THOP1P52888 689 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 EIF3EP60228 445 aaKnown RBP20.46■□□□□ 0.87
CCS-208ENST00000533244 ARHGEF7Q14155 803 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 PTK2BQ14289 1009 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms