RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 HEY1Q9Y5J3 304 aa30.37■■■□□ 2.45
SSSCA1-207ENST00000533115 TPP1O14773 563 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 APOL1O14791 398 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 FZD6O60353 706 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 GCATO75600 419 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 HEXIM1O94992 359 aaKnown RBP30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 CAPNS1P04632 268 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 HNF1BP35680 557 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 BLKP51451 505 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 CLDN6P56747 220 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 C1orf61Q13536 156 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 DEFB133Q30KQ1 61 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 ZCCHC8Q6NZY4 707 aaKnown RBP30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 ENPP7Q6UWV6 458 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 ATL2Q8NHH9 583 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 TPCN2Q8NHX9 752 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 MCCC1Q96RQ3 725 aaPredicted RBP30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 LGMNQ99538 433 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 IL12RB2Q99665 862 aa30.36■■■□□ 2.45
SSSCA1-207ENST00000533115 LY6G6EA0A0G2JKS1 128 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 HLA-DQB2P05538 268 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 PDHA1P08559 390 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 JUPP14923 745 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 ZFXP17010 805 aaPredicted RBP30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 HK3P52790 923 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 PPIDQ08752 370 aaKnown RBP30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 CAMK2BQ13554 666 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 ALG11Q2TAA5 492 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 HES3Q5TGS1 186 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 USP45Q70EL2 814 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 RFX6Q8HWS3 928 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 CBARPQ8N350 705 aaPredicted RBP30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 ARRDC2Q8TBH0 407 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 TSACCQ96A04 125 aaPredicted RBP30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 WDR92Q96MX6 357 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 LUC7LQ9NQ29 371 aaKnown RBP30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 EVA1BQ9NVM1 165 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 KCTD5Q9NXV2 234 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 SALL4Q9UJQ4 1053 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 ALG6Q9Y672 507 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 U3KQA8 63 aa30.35■■■□□ 2.45
SSSCA1-207ENST00000533115 NPIPB15A6NHN6 443 aaPredicted RBP30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 MYF5P13349 255 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 LHCGRP22888 699 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 DUSP3P51452 185 aaPredicted RBP30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 E2F1Q01094 437 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 IHHQ14623 411 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 DENND2CQ68D51 928 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 ESRP1Q6NXG1 681 aaKnown RBP30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 HID1Q8IV36 788 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 NDUFAF2Q8N183 169 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 FUBP1Q96AE4 644 aaKnown RBP30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 NUS1Q96E22 293 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 CLPBQ9H078 707 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 KLQ9UEF7 1012 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 TFR2Q9UP52 801 aa30.34■■■□□ 2.45
SSSCA1-207ENST00000533115 LMO7DNF2Z398 122 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 KCNK1O00180 336 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 CACNB4O00305 520 aaPredicted RBP30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 PSTPIP1O43586 416 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 RASGRP1O95267 797 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 JCHAINP01591 159 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 KRT10P13645 584 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 TSHRP16473 764 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 CTPS1P17812 591 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 TRIM23P36406 574 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 KIAA1024LP59773 190 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 SRP54P61011 504 aaKnown RBP30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 NIPAL4Q0D2K0 466 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 ARHGEF7Q14155 803 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 PTPRRQ15256 657 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 PNCKQ6P2M8 343 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 MFSD7Q6UXD7 560 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 FSTL5Q8N475 847 aaPredicted RBP30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 NCKIPSDQ9NZQ3 722 aa30.33■■■□□ 2.45
SSSCA1-207ENST00000533115 KNTC1P50748 2209 aa30.32■■■□□ 2.45
SSSCA1-207ENST00000533115 FREM2Q5SZK8 3169 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 A0A0A6YYK5 440 aaPredicted RBP30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 TRABD2BA6NFA1 517 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 PSMD11O00231 422 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 ANXA6P08133 673 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 HOXC4P09017 264 aaPredicted RBP30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 ALPIP09923 528 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 FECHP22830 423 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 IFI35P80217 286 aaPredicted RBP30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 INSM1Q01101 510 aaPredicted RBP30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 PDK1Q15118 436 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 NPNTQ6UXI9 565 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 NYAP1Q6ZVC0 841 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 HSD11B1LQ7Z5J1 315 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 TSPAN33Q86UF1 283 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 TMTC1Q8IUR5 882 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 PELI3Q8N2H9 469 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 TDRD1Q9BXT4 1180 aaKnown RBP30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 GOLPH3Q9H4A6 298 aa30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 CCDC86Q9H6F5 360 aaKnown RBP30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 EPN1Q9Y6I3 576 aaPredicted RBP30.32■■■□□ 2.44
SSSCA1-207ENST00000533115 SOWAHDA6NJG2 315 aa30.31■■■□□ 2.44
SSSCA1-207ENST00000533115 KRT37O76014 449 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms