RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 EML4Q9HC35 981 aaKnown RBP8.32□□□□□ -1.08
TRIM53BP-201ENST00000532912 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
TRIM53BP-201ENST00000532912 CACNA2D2Q9NY47 1150 aa8.32□□□□□ -1.08
TRIM53BP-201ENST00000532912 RIMKLBQ9ULI2 386 aa8.32□□□□□ -1.08
TRIM53BP-201ENST00000532912 DTNAQ9Y4J8 743 aa8.32□□□□□ -1.08
TRIM53BP-201ENST00000532912 PCDHB5Q9Y5E4 795 aa8.32□□□□□ -1.08
TRIM53BP-201ENST00000532912 ANKRD36A6QL64 1941 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 CEP350Q5VT06 3117 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 CAPN8A6NHC0 703 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 TRIM38O00635 465 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 CFLARO15519 480 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 CA12O43570 354 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 TBC1D4O60343 1298 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PRAMEF11O60813 436 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 DNAJA2O60884 412 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 RAMP2O60895 175 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 GOT2P00505 430 aaKnown RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 EPOP01588 193 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 C8BP07358 591 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 SMIM18P0DKX4 95 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 CKBP12277 381 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 MTHFD2P13995 350 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 HLA-DPA1P20036 260 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PSMA3P25788 255 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 YWHAQP27348 245 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 MSX2P35548 267 aaPredicted RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PBX3P40426 434 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PEX19P40855 299 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 MAPKAPK2P49137 400 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 YBEYP58557 167 aaPredicted RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PSME3P61289 254 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 FOLH1Q04609 750 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PRKCZQ05513 592 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 RING1Q06587 406 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 ITKQ08881 620 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 ART3Q13508 389 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 TLR1Q15399 786 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 REP15Q6BDI9 236 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 HACD2Q6Y1H2 254 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 SDCCAG8Q86SQ7 713 aaPredicted RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 BHLHE22Q8NFJ8 381 aaPredicted RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 ADCY4Q8NFM4 1077 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 GABPB2Q8TAK5 448 aaPredicted RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 GPR152Q8TDT2 470 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 ZNF483Q8TF39 744 aaPredicted RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 NCSTNQ92542 709 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 ASB9Q96DX5 294 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PHF21BQ96EK2 531 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 DUS3LQ96G46 650 aaKnown RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 DNAJC1Q96KC8 554 aaKnown RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 TBATAQ96M53 351 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 PKP2Q99959 881 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 ALG9Q9H6U8 611 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 POPDC3Q9HBV1 291 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 OLA1Q9NTK5 396 aaKnown RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 MRGBPQ9NV56 204 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 SUCOQ9UBS9 1254 aaKnown RBP8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 CD300AQ9UGN4 299 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 NOD1Q9Y239 953 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 TRAF6Q9Y4K3 522 aa8.31□□□□□ -1.08
TRIM53BP-201ENST00000532912 CCDC162PA2VCL2 907 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 MTMR11A4FU01 709 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 ENO4A6NNW6 628 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 E7ENX8 843 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 PSMD12O00232 456 aaPredicted RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 UBDO15205 165 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 SOAT2O75908 522 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 FGF1P05230 155 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 FGF4P08620 206 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 ALDOCP09972 364 aaKnown RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 HDCP19113 662 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 OGNP20774 298 aaKnown RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 HOXD9P28356 352 aaPredicted RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 OR1G1P47890 313 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 TM4SF4P48230 202 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 HERVK_113P63132 956 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 PRAMEP78395 509 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 IRX1P78414 480 aaPredicted RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 CREB5Q02930 508 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 ILF2Q12905 390 aaKnown RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 TAF10Q12962 218 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 PTPRCAPQ14761 206 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 POLD3Q15054 466 aaPredicted RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 PDK3Q15120 406 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 TYSND1Q2T9J0 566 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 GRAMD1BQ3KR37 738 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 MMEL1Q495T6 779 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 LIN52Q52LA3 116 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 SETMARQ53H47 684 aaPredicted RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 ACBD5Q5T8D3 534 aaPredicted RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 RSPO2Q6UXX9 243 aaPredicted RBP8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 PHYKPLQ8IUZ5 450 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 FUNDC1Q8IVP5 155 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 RNF148Q8N7C7 305 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 FAM156AQ8NDB6 213 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 ICA1LQ8NDH6 482 aa8.3□□□□□ -1.08
TRIM53BP-201ENST00000532912 OR6P1Q8NGX9 317 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms