RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CYP51A1Q16850 503 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 FKBP9P1Q75LS8 142 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 METTL23Q86XA0 190 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ATP6V0D2Q8N8Y2 350 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 HPDLQ96IR7 371 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 COG8Q96MW5 612 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 HTATIP2Q9BUP3 242 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RSAD1Q9HA92 442 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DPP3Q9NY33 737 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 EHD3Q9NZN3 535 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DUX4Q9UBX2 424 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 FETUBQ9UGM5 382 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 NUDT5Q9UKK9 219 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TPRKBQ9Y3C4 175 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 COL2A1P02458 1487 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CYB561D2O14569 222 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 TRIM13O60858 407 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CPNE3O75131 537 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CABYRO75952 493 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SELPP16109 830 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PTPN2P17706 415 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 RRM2P31350 389 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SPRP35270 261 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 IL5RAQ01344 420 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 MERTKQ12866 999 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CA9Q16790 459 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 MGAT5BQ3V5L5 792 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM171A1Q5VUB5 890 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 AGAP7PQ5VUJ5 663 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SDHAF4Q5VUM1 108 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SPOCD1Q6ZMY3 1216 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ACOT1Q86TX2 421 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 TICAM1Q8IUC6 712 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 P3H2Q8IVL5 708 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PHC2Q8IXK0 858 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 TMEM199Q8N511 208 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ANKLE1Q8NAG6 615 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC4A11Q8NBS3 891 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 OR9Q1Q8NGQ5 310 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 FEZF2Q8TBJ5 459 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 TBC1D15Q8TC07 691 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC44A1Q8WWI5 657 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ARNTL2Q8WYA1 636 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 NCLNQ969V3 563 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SIPA1Q96FS4 1042 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 YTHDF1Q9BYJ9 559 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 FRMD8P1Q9BZ68 369 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 DHX35Q9H5Z1 703 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 RETREG1Q9H6L5 497 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 TASP1Q9H6P5 420 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 RPF2Q9H7B2 306 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PNPLA8Q9NP80 782 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 POLE4Q9NR33 117 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 WDR70Q9NW82 654 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ADPRHL2Q9NX46 363 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 RANBP2P49792 3224 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 DDX60LQ5H9U9 1706 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CDK5RAP2Q96SN8 1893 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 TCRBV9S1A1TA0A576 114 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 DHRS12A0PJE2 317 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 LIASO43766 372 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 BNIP3LO60238 219 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PRPSAP2O60256 369 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 HMBSP08397 361 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CLTBP09497 229 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 OR4Q2P0C623 313 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CKBP12277 381 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CHRNB2P17787 502 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CCNCP24863 283 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 AFF1P51825 1210 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 HADHBP55084 474 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PPP2R2BQ00005 443 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 CHRNB3Q05901 458 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PRKAA1Q13131 559 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 STK11Q15831 433 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM91A1Q658Y4 838 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 NANOGP8Q6NSW7 305 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC27A1Q6PCB7 646 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF467Q7Z7K2 595 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 KBTBD6Q86V97 674 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 FIBCD1Q8N539 461 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 LZTR1Q8N653 840 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 UBR7Q8N806 425 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 Q8N9G6 341 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 JPH3Q8WXH2 748 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 LPGAT1Q92604 370 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PMEPA1Q969W9 287 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 MTIF3Q9H2K0 278 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM105AQ9NUU6 356 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 PAQR5Q9NXK6 330 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 SMPD3Q9NY59 655 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 DRG1Q9Y295 367 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 MYH7P12883 1935 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 E5RI56 91 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 STK25O00506 426 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 EIF3DO15371 548 aaKnown RBP eCLIP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 HTRA2O43464 458 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 OR7A10O76100 309 aa6.81□□□□□ -1.32
TGFBR3-209ENST00000532540 ATE1O95260 518 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms