RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 ARID3BQ8IVW6 561 aaPredicted RBP12.32□□□□□ -0.44
CHD7-211ENST00000532149 SUGP1Q8IWZ8 645 aaKnown RBP12.32□□□□□ -0.44
CHD7-211ENST00000532149 CARNMT1Q8N4J0 409 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 ARL14EPQ8N8R7 260 aaPredicted RBP12.32□□□□□ -0.44
CHD7-211ENST00000532149 RHEBL1Q8TAI7 183 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 CDKN2AIPNLQ96HQ2 116 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 ELMO2Q96JJ3 720 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 UBXN10Q96LJ8 280 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 RMDN2Q96LZ7 410 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 ZNF778Q96MU6 729 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 TCF25Q9BQ70 676 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 C1QTNF1Q9BXJ1 281 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 PFDN4Q9NQP4 134 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 APPL1Q9UKG1 709 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 PKP3Q9Y446 797 aa12.32□□□□□ -0.44
CHD7-211ENST00000532149 C2orf71A6NGG8 1288 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 TRPC5OSA6NMA1 111 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 G3V2L1 256 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 H3BMM5 538 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 GRM6O15303 877 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 RASSF9O75901 435 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 PAPLNO95428 1278 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 HSPA4LO95757 839 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 S1PR4O95977 384 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 LINC00271P0C7V0 271 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 ACRP10323 421 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 IRF1P10914 325 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 NQO1P15559 274 aaKnown RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 ITGB8P26012 769 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 GABRB3P28472 473 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 PRDX6P30041 224 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 HMGCLP35914 325 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 CHRNA4P43681 627 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 ZNF140P52738 457 aaPredicted RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 STC1P52823 247 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 SNRPD1P62314 119 aaKnown RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 ARF5P84085 180 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 NFKB2Q00653 900 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 PPARDQ03181 441 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 CTBP1Q13363 440 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 ARMC12Q5T9G4 340 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 TXNDC8Q6A555 127 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 LRRC8EQ6NSJ5 796 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 GAREM2Q75VX8 874 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 GLT6D1Q7Z4J2 308 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 MTDHQ86UE4 582 aaKnown RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 CIR1Q86X95 450 aaPredicted RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 C10orf107Q8IVU9 208 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 RAVER1Q8IY67 606 aaKnown RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 CBARPQ8N350 705 aaPredicted RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 NKAPQ8N5F7 415 aaKnown RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 BLOC1S5Q8TDH9 187 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 ALG14Q96F25 216 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 OMDQ99983 421 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 CPEB1Q9BZB8 566 aaKnown RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 MYLK2Q9H1R3 596 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 C1orf21Q9H246 121 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 KCNK13Q9HB14 408 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 GPAMQ9HCL2 828 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 ZNF334Q9HCZ1 680 aaPredicted RBP12.31□□□□□ -0.44
CHD7-211ENST00000532149 TAS2R13Q9NYV9 303 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 DCTN4Q9UJW0 460 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 SLC8A2Q9UPR5 921 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 PCDHB1Q9Y5F3 818 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 OBSL1O75147 1896 aa12.31□□□□□ -0.44
CHD7-211ENST00000532149 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 TARM1B6A8C7 271 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 LEFTY2O00292 366 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 STX7O15400 261 aaKnown RBP12.3□□□□□ -0.44
CHD7-211ENST00000532149 MGRN1O60291 552 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 FZD6O60353 706 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 NDUFS3O75489 264 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 WFS1O76024 890 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 ESR1P03372 595 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 TPBGLP0DKB5 382 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 SERPINA4P29622 427 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 SLC8A1P32418 973 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 CA8P35219 290 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 CTNNB1P35222 781 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 PTGER3P43115 390 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 EPHB1P54762 984 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 TAS2R39P59534 338 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 NCALDP61601 193 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 POLR2LP62875 67 aaKnown RBP12.3□□□□□ -0.44
CHD7-211ENST00000532149 BCL2L1Q07817 233 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 RCN2Q14257 317 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 E2F5Q15329 346 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 GPR33Q49SQ1 333 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 PPM1JQ5JR12 505 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 HECTD2Q5U5R9 776 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 C16orf59Q7L2K0 433 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 RAB44Q7Z6P3 723 aaPredicted RBP12.3□□□□□ -0.44
CHD7-211ENST00000532149 CMC1Q7Z7K0 106 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms