RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 NDUFS2O75306 463 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 LRCH4O75427 683 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 TUSC2O75896 110 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 DNTTP04053 509 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 TMEM253P0C7T8 217 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CAPN3P20807 821 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CD6P30203 668 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 MIPP30301 263 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 OXTRP30559 389 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 HTR7P34969 479 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PCK1P35558 622 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 SSR1P43307 286 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 MAPKAPK2P49137 400 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARL4DP49703 201 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CLNS1AP54105 237 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 NAP1L1P55209 391 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 SCAND1P57086 179 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 TPI1P60174 286 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 RPS14P62263 151 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CREB5Q02930 508 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZBTB16Q05516 673 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ELAVL3Q14576 367 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ACAP1Q15027 740 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 POLD3Q15054 466 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 LLGL1Q15334 1064 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 DLG2Q15700 870 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CCDC38Q502W7 563 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 TMEM177Q53S58 311 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PPP6R3Q5H9R7 873 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 SPDYCQ5MJ68 293 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 SLC35F1Q5T1Q4 408 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARTNQ5T4W7 220 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ERMARDQ5T6L9 678 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 C9orf64Q5T6V5 341 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PMS2CLQ68D20 193 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZNF776Q68DI1 518 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ABHD17CQ6PCB6 329 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 C16orf54Q6UWD8 224 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 LINGO4Q6UY18 593 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 NLRP14Q86W24 1093 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PSTKQ8IV42 348 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 TMEFF1Q8IYR6 380 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARFGAP1Q8N6T3 406 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 GPR161Q8N6U8 529 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 NIPA2Q8N8Q9 360 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 TC2NQ8N9U0 490 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ATP11CQ8NB49 1132 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 OR7D4Q8NG98 312 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZNF564Q8TBZ8 553 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 GANCQ8TET4 914 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 FRS2Q8WU20 508 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 GTPBP3Q969Y2 492 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 BTBD6Q96KE9 485 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PEBP4Q96S96 227 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PSMB7Q99436 277 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 EIF3CQ99613 913 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 SNRNP25Q9BV90 132 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PACSIN1Q9BY11 444 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ARRDC1-AS1Q9H2J1 176 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 DHX35Q9H5Z1 703 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CATSPERBQ9H7T0 1116 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZWILCHQ9H900 591 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 TMEM248Q9NWD8 314 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 GPATCH2LQ9NWQ4 482 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 DONSONQ9NYP3 566 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 USP36Q9P275 1121 aaKnown RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CTTNBP2NLQ9P2B4 639 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 UVRAGQ9P2Y5 699 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZNF212Q9UDV6 495 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CGGBP1Q9UFW8 167 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 VPS51Q9UID3 782 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 MBD1Q9UIS9 605 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PADI4Q9UM07 663 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 HPCAL4Q9UM19 191 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 USP18Q9UMW8 372 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 NENFQ9UMX5 172 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 NEU3Q9UQ49 428 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 HS3ST2Q9Y278 367 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZNF451Q9Y4E5 1061 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PCDHGB6Q9Y5F9 930 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 PCDHGA5Q9Y5G8 931 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CACNA1IQ9P0X4 2223 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 CACNA1HO95180 2353 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
HMGB1P42-201ENST00000532126 BCLAF3A2AJT9 711 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 WASH4PA8MWX3 477 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 K7ERQ8 282 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 EEF2KO00418 725 aaKnown RBP5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 LRP3O75074 770 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 UBOX5O94941 541 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 EPN2O95208 641 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 IGLV3-19P01714 112 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 SRCP12931 536 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 VAV1P15498 845 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 GLDCP23378 1020 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 LSP1P33241 339 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 ACVRL1P37023 503 aa5.87□□□□□ -1.47
HMGB1P42-201ENST00000532126 MPLP40238 635 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms