RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 SMIM14Q96QK8 99 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 LYSMD1Q96S90 227 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 TBL1YQ9BQ87 522 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 HINFPQ9BQA5 517 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 LRRC40Q9H9A6 602 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 EBF2Q9HAK2 575 aa22.34■■□□□ 1.17
LRRK1-208ENST00000532029 SPAG17Q6Q759 2223 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 ERI2A8K979 691 aaKnown RBP22.33■■□□□ 1.17
LRRK1-208ENST00000532029 PRR5-ARHGAP8B1AHC4 643 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 PRAMEF26H0Y7S4 382 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 BCAT2O15382 392 aaPredicted RBP22.33■■□□□ 1.17
LRRK1-208ENST00000532029 ATXN1LP0C7T5 689 aaKnown RBP22.33■■□□□ 1.17
LRRK1-208ENST00000532029 ZNF30P17039 623 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 HNRNPA2B1P22626 353 aaKnown RBP22.33■■□□□ 1.17
LRRK1-208ENST00000532029 LHCGRP22888 699 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 ACOX1Q15067 660 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 TRIP13Q15645 432 aaPredicted RBP22.33■■□□□ 1.17
LRRK1-208ENST00000532029 SLC1A5Q15758 541 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 DENND2CQ68D51 928 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 CRTC1Q6UUV9 634 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 TSPAN33Q86UF1 283 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 KLHL7Q8IXQ5 586 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 PDCD7Q8N8D1 485 aaKnown RBP22.33■■□□□ 1.17
LRRK1-208ENST00000532029 KIF18AQ8NI77 898 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 CEP76Q8TAP6 659 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 MYOCQ99972 504 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 APOL2Q9BQE5 337 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 ORAI3Q9BRQ5 295 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 TM9SF3Q9HD45 589 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 AASDHPPTQ9NRN7 309 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 TMEM74BQ9NUR3 256 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 CDC23Q9UJX2 597 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 COQ6Q9Y2Z9 468 aa22.33■■□□□ 1.17
LRRK1-208ENST00000532029 C1orf232A0A0U1RR37 186 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 A0A1B0GTW7 788 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 PSMD11O00231 422 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 AP2A1O95782 977 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 ADRA1AP35348 466 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 CHRNA4P43681 627 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 VPS41P49754 854 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 RACK1P63244 317 aaKnown RBP22.32■■□□□ 1.16
LRRK1-208ENST00000532029 BASP1P80723 227 aaKnown RBP22.32■■□□□ 1.16
LRRK1-208ENST00000532029 CKAP4Q07065 602 aaKnown RBP22.32■■□□□ 1.16
LRRK1-208ENST00000532029 SEMA5AQ13591 1074 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 FGL2Q14314 439 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 SPARCL1Q14515 664 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 STAT4Q14765 748 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 PPP1R7Q15435 360 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 DUOXA1Q1HG43 343 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 PEAR1Q5VY43 1037 aaPredicted RBP22.32■■□□□ 1.16
LRRK1-208ENST00000532029 LRRC66Q68CR7 880 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 KCTD11Q693B1 232 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 RUBCNQ92622 972 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 SLC6A18Q96N87 628 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 MAGEE1Q9HCI5 957 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 FZD3Q9NPG1 666 aa22.32■■□□□ 1.16
LRRK1-208ENST00000532029 TNRC6BQ9UPQ9 1833 aaKnown RBP22.31■■□□□ 1.16
LRRK1-208ENST00000532029 PIRTP0C851 137 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 TEAD4Q15561 434 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 RANBP10Q6VN20 620 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 ASCL5Q7RTU5 278 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 LINC00523Q86TU6 105 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 DENND6BQ8NEG7 585 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 C1orf216Q8TAB5 229 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 CCHCR1Q8TD31 782 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 LENG8Q96PV6 779 aaPredicted RBP22.31■■□□□ 1.16
LRRK1-208ENST00000532029 GPR63Q9BZJ6 419 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 KCTD5Q9NXV2 234 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 HACD3Q9P035 362 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 PCYOX1Q9UHG3 505 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 ZNF711Q9Y462 761 aa22.31■■□□□ 1.16
LRRK1-208ENST00000532029 GOLGA8CPA6NN73 597 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 USP12O75317 370 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 RECQL5O94762 991 aaPredicted RBP22.3■■□□□ 1.16
LRRK1-208ENST00000532029 CLDN7O95471 211 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 CFIP05156 583 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 APRTP07741 180 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 AFF3P51826 1226 aaKnown RBP22.3■■□□□ 1.16
LRRK1-208ENST00000532029 GPS1Q13098 491 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 OLIG2Q13516 323 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 TUBB2AQ13885 445 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 CCDC6Q16204 474 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 SKA1Q96BD8 255 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 COQ10AQ96MF6 247 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 TUBB2BQ9BVA1 445 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 TRABDQ9H4I3 376 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 ZFYVE1Q9HBF4 777 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 SHOC2Q9UQ13 582 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 SLCO1B1Q9Y6L6 691 aa22.3■■□□□ 1.16
LRRK1-208ENST00000532029 A0A0U1RQS6 177 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 FPGTO14772 594 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 WNT9AO14904 365 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 KHNYNO15037 678 aaKnown RBP22.29■■□□□ 1.16
LRRK1-208ENST00000532029 RAD51BO15315 384 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 LRP3O75074 770 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 SLC4A1P02730 911 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 STC1P52823 247 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 DR1Q01658 176 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 SPEM2Q0P670 501 aa22.29■■□□□ 1.16
LRRK1-208ENST00000532029 LRRC14Q15048 493 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms