RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 IRX6P78412 446 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-220ENST00000531466 IRX1P78414 480 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-220ENST00000531466 KRTAP13-3Q3SY46 172 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 C15orf39Q6ZRI6 1047 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 C1orf87Q8N0U7 546 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 HAUS8Q9BT25 410 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 CD207Q9UJ71 328 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 AMDHD2Q9Y303 409 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 NFE2L3Q9Y4A8 694 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 AKR1B15C9JRZ8 316 aaPredicted RBP4.21□□□□□ -1.74
PTPRK-220ENST00000531466 TNNT1P13805 278 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 SP100P23497 879 aaPredicted RBP4.21□□□□□ -1.74
PTPRK-220ENST00000531466 CHATP28329 748 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 CHRNB4P30926 498 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 CLK1P49759 484 aaKnown RBP4.21□□□□□ -1.74
PTPRK-220ENST00000531466 PRKAA2P54646 552 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 GNB1P62873 340 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 PICALMQ13492 652 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 EDRF1Q3B7T1 1238 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 SPINK14Q6IE38 97 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 SLC36A4Q6YBV0 504 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 MOB3CQ70IA8 216 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 TBC1D26Q86UD7 250 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 ZNF34Q8IZ26 560 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 DSELQ8IZU8 1212 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 LRR1Q96L50 414 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 TMEM160Q9NX00 188 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 OGFRQ9NZT2 677 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 PAK5Q9P286 719 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 RNF215Q9Y6U7 377 aa4.21□□□□□ -1.74
PTPRK-220ENST00000531466 CACNA1FO60840 1977 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 MYOD1P15172 320 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 CD58P19256 250 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 EIF2S3P41091 472 aaKnown RBP4.2□□□□□ -1.74
PTPRK-220ENST00000531466 HOXA1P49639 335 aaPredicted RBP4.2□□□□□ -1.74
PTPRK-220ENST00000531466 CLCNKAP51800 687 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 ITGADQ13349 1161 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 SIRPB2Q5JXA9 342 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 CCNYL2Q5T2Q4 361 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 GPATCH4Q5T3I0 446 aaKnown RBP4.2□□□□□ -1.74
PTPRK-220ENST00000531466 SFMBT2Q5VUG0 894 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 XRRA1Q6P2D8 792 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 HERC6Q8IVU3 1022 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 OR6Y1Q8NGX8 325 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 HCAR2Q8TDS4 363 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 SNAPC3Q92966 411 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 ST6GAL2Q96JF0 529 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 ASCL2Q99929 193 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 POLR3CQ9BUI4 534 aaPredicted RBP4.2□□□□□ -1.74
PTPRK-220ENST00000531466 PDZD7Q9H5P4 517 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 SLC7A10Q9NS82 523 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 DACT1Q9NYF0 836 aa4.2□□□□□ -1.74
PTPRK-220ENST00000531466 SMIM1B2RUZ4 78 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 HHLA1C9JL84 531 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 NR5A2O00482 541 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 KLK8O60259 260 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 G6PDP11413 515 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 NR1H2P55055 460 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 PUM3Q15397 648 aaKnown RBP4.19□□□□□ -1.74
PTPRK-220ENST00000531466 TRNP1Q6NT89 227 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 SLC27A1Q6PCB7 646 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 ATF7IPQ6VMQ6 1270 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 RNF113BQ8IZP6 322 aaKnown RBP4.19□□□□□ -1.74
PTPRK-220ENST00000531466 MAGEC3Q8TD91 643 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 C8orf48Q96LL4 319 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 RMDN3Q96TC7 470 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 CDK19Q9BWU1 502 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 SLC32A1Q9H598 525 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 SLC52A3Q9NQ40 469 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 ZNF624Q9P2J8 865 aaPredicted RBP4.19□□□□□ -1.74
PTPRK-220ENST00000531466 OR2W1Q9Y3N9 320 aa4.19□□□□□ -1.74
PTPRK-220ENST00000531466 A0A1W2PNU3 283 aaPredicted RBP4.18□□□□□ -1.74
PTPRK-220ENST00000531466 ARHGAP10A1A4S6 786 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 CEP104O60308 925 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 CHRM4P08173 479 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 MCM2P49736 904 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 ISL1P61371 349 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 TBL3Q12788 808 aaKnown RBP4.18□□□□□ -1.74
PTPRK-220ENST00000531466 GRIK2Q13002 908 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 ZNF239Q16600 458 aaKnown RBP4.18□□□□□ -1.74
PTPRK-220ENST00000531466 CCDC96Q2M329 555 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 CBWD5Q5RIA9 395 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 AGBL3Q8NEM8 1001 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 PPM1EQ8WY54 764 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 TM9SF4Q92544 642 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 ZNF689Q96CS4 500 aaPredicted RBP4.18□□□□□ -1.74
PTPRK-220ENST00000531466 PCGF6Q9BYE7 350 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 LMAN2LQ9H0V9 348 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 WDR13Q9H1Z4 485 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 CHODLQ9H9P2 273 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 FKRPQ9H9S5 495 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 UPF2Q9HAU5 1272 aaKnown RBP4.18□□□□□ -1.74
PTPRK-220ENST00000531466 SMYD2Q9NRG4 433 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 RCOR1Q9UKL0 485 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 NOTCH2Q04721 2471 aa4.18□□□□□ -1.74
PTPRK-220ENST00000531466 IGLV1-44P01699 117 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 PCNAP12004 261 aa4.17□□□□□ -1.74
PTPRK-220ENST00000531466 PTPN2P17706 415 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms