RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 B3GNT2Q9NY97 397 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 WARS2Q9UGM6 360 aaKnown RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SFMBT1Q9UHJ3 866 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 AGTPBP1Q9UPW5 1226 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 JAG2Q9Y219 1238 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 LEUTXA8MZ59 168 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 H3BMM5 538 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 TOR1BO14657 336 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SEMA3DO95025 777 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 UMPSP11172 480 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 EEF1B2P24534 225 aaKnown RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CD68P34810 354 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CRKLP46109 303 aaKnown RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 DEFA1P59665 94 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 DEFA3P59666 94 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ITPK1Q13572 414 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SQLEQ14534 574 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CARTPTQ16568 116 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 PARP15Q460N3 678 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 PRMT9Q6P2P2 845 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ZBTB33Q86T24 672 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 PLCZ1Q86YW0 608 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 SETD6Q8TBK2 473 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ZFAND1Q8TCF1 268 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ABCB10Q9NRK6 738 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 TOR4AQ9NXH8 423 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 ACTR3BQ9P1U1 418 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-214ENST00000530886 HCN4Q9Y3Q4 1203 aa8.16□□□□□ -1.1
CSDE1-214ENST00000530886 KCNU1A8MYU2 1149 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 NRP1O14786 923 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 ENDOD1O94919 500 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SNAP29O95721 258 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 LSM8O95777 96 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 APOA4P06727 396 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 ASNSP08243 561 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SHMT2P34897 504 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 EPHX2P34913 555 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 RPS5P46782 204 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 WNT7BP56706 349 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SEMA3BQ13214 749 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 MTM1Q13496 603 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 KIZQ2M2Z5 673 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 CYP2R1Q6VVX0 501 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 STRADAQ7RTN6 431 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 USP37Q86T82 979 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 CBWD2Q8IUF1 395 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TMEM35BQ8NCS4 154 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 NPLOC4Q8TAT6 608 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 FBLIM1Q8WUP2 373 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 HDAC10Q969S8 669 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 AURKBQ96GD4 344 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 ZNF578Q96N58 590 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 MUS81Q96NY9 551 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 ZFP14Q9HCL3 533 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 DDX28Q9NUL7 540 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 PDE10AQ9Y233 779 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 CSNK1G3Q9Y6M4 447 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 GOLGB1Q14789 3259 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 KIAA1217Q5T5P2 1943 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 MAGEB16A2A368 324 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SGTAO43765 313 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 MRPS14O60783 128 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SRP72O76094 671 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SUPT7LO94864 414 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 PRSS23O95084 383 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TRIM16O95361 564 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 FOSP01100 380 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TFEBP19484 476 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 IL1R2P27930 398 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 ATP4BP51164 291 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 GTF2IP78347 998 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 RIPPLY1Q0D2K3 151 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 EPS8Q12929 822 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TNK1Q13470 666 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SNRNP35Q16560 246 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TRAPPC3LQ5T215 181 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 GPATCH4Q5T3I0 446 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 RBM20Q5T481 1227 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TBC1D21Q8IYX1 336 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 DEPDC4Q8N2C3 294 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TCAIMQ8N3R3 496 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 PCDH20Q8N6Y1 951 aaKnown RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 TTLQ8NG68 377 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 HMGCLL1Q8TB92 370 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 OMA1Q96E52 524 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 MARK4Q96L34 752 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 GATA5Q9BWX5 397 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-214ENST00000530886 RHOBTB2Q9BYZ6 727 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 SCPEP1Q9HB40 452 aa8.15□□□□□ -1.1
CSDE1-214ENST00000530886 MYLKQ15746 1914 aa8.15□□□□□ -1.11
CSDE1-214ENST00000530886 LTBP4Q8N2S1 1624 aa8.15□□□□□ -1.11
CSDE1-214ENST00000530886 BRCA1P38398 1863 aaKnown RBP8.15□□□□□ -1.11
CSDE1-214ENST00000530886 CCDC78A2IDD5 438 aa8.15□□□□□ -1.11
CSDE1-214ENST00000530886 LINC00862A6NCI5 91 aa8.15□□□□□ -1.11
CSDE1-214ENST00000530886 TRPC5OSA6NMA1 111 aa8.15□□□□□ -1.11
CSDE1-214ENST00000530886 K7ENM7 598 aa8.15□□□□□ -1.11
CSDE1-214ENST00000530886 PLK4O00444 970 aa8.15□□□□□ -1.11
CSDE1-214ENST00000530886 B4GAT1O43505 415 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms