RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TOMM40O96008 361 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 CHRNB1P11230 501 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 MX1P20591 662 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 MCCP23508 829 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 PNLIPRP1P54315 467 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 BEX3Q00994 111 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 BIRC2Q13490 618 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 CCDC96Q2M329 555 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 C6orf10Q5SRN2 563 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 NUGGCQ68CJ6 796 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 CCDC129Q6ZRS4 1044 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 RFX8Q6ZV50 586 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 RTL10Q7L3V2 364 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 SCAMP5Q8TAC9 235 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 WDR83Q9BRX9 315 aaKnown RBP7.47□□□□□ -1.21
CSDE1-213ENST00000530784 TMEM120AQ9BXJ8 343 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 BRD8Q9H0E9 1235 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 MTIF3Q9H2K0 278 aaKnown RBP7.47□□□□□ -1.21
CSDE1-213ENST00000530784 IL21RQ9HBE5 538 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 LRFN1Q9P244 771 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 PCDHA10Q9Y5I2 948 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 UNC80Q8N2C7 3258 aa7.47□□□□□ -1.21
CSDE1-213ENST00000530784 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-213ENST00000530784 CXorf65A6NEN9 183 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 KCNAB3O43448 404 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 NMT2O60551 498 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 CD4P01730 458 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 MAPK7Q13164 816 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 ITGA7Q13683 1181 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 PRTGQ2VWP7 1150 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 LIN54Q6MZP7 749 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 NFRKBQ6P4R8 1299 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 CXCL17Q6UXB2 119 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 CYB5R4Q7L1T6 521 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 SLC44A2Q8IWA5 706 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-213ENST00000530784 FBXO16Q8IX29 292 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-213ENST00000530784 OTUD7AQ8TE49 926 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-213ENST00000530784 RMDN3Q96TC7 470 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 HIPK3Q9H422 1215 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 SPAG4Q9NPE6 437 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 CYP39A1Q9NYL5 469 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 TAGLN3Q9UI15 199 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 FBXO4Q9UKT5 387 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 CCPG1Q9ULG6 757 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.46□□□□□ -1.22
CSDE1-213ENST00000530784 LRRC37A2A6NM11 1700 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 ASTN1O14525 1302 aa7.46□□□□□ -1.22
CSDE1-213ENST00000530784 MBD3L5A6NJ08 208 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-213ENST00000530784 EFCAB8A8MWE9 144 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 F5H423 210 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-213ENST00000530784 ACKR2O00590 384 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 INSIG1O15503 277 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 RANBP6O60518 1105 aaKnown RBP7.45□□□□□ -1.22
CSDE1-213ENST00000530784 ZC3H11AO75152 810 aaKnown RBP eCLIP7.45□□□□□ -1.22
CSDE1-213ENST00000530784 ICAM1P05362 532 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 SNHG28P0DPA3 235 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 ADPRHP54922 357 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 SNAP25P60880 206 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 GAD2Q05329 585 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 C10orf76Q5T2E6 689 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 ASPHD1Q5U4P2 390 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 KLHL17Q6TDP4 642 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 RASGRP2Q7LDG7 609 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 USP38Q8NB14 1042 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 VPS37AQ8NEZ2 397 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 POF1BQ8WVV4 589 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 SEZ6LQ9BYH1 1024 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 PABPC3Q9H361 631 aaKnown RBP7.45□□□□□ -1.22
CSDE1-213ENST00000530784 SEPSECSQ9HD40 501 aaKnown RBP7.45□□□□□ -1.22
CSDE1-213ENST00000530784 PRDM8Q9NQV8 689 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 DACT1Q9NYF0 836 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 ANAPC4Q9UJX5 808 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 TNFSF13BQ9Y275 285 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 Q9Y3F1 56 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 COMMD10Q9Y6G5 202 aa7.45□□□□□ -1.22
CSDE1-213ENST00000530784 LAMA2P24043 3122 aaKnown RBP7.45□□□□□ -1.22
CSDE1-213ENST00000530784 MYH4Q9Y623 1939 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 MCIDASD6RGH6 385 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 HEXIM1O94992 359 aaKnown RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 OAZ2O95190 189 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 SYF2O95926 243 aaKnown RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 RCAN1P53805 252 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 CCL23P55773 120 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 PSMC6P62333 389 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 AP2B1P63010 937 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 ODF3L2Q3SX64 289 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 ARL13AQ5H913 290 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 KIAA1324Q6UXG2 1013 aaKnown RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 RAB11FIP2Q7L804 512 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 CCDC117Q8IWD4 279 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 PPM1EQ8WY54 764 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 HERVK_113Q902F9 699 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 EVI5LQ96CN4 794 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 CAMK1GQ96NX5 476 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 RPS6KC1Q96S38 1066 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 TRPV6Q9H1D0 765 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 RANBP17Q9H2T7 1088 aaKnown RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 ELAC1Q9H777 363 aaKnown RBP7.44□□□□□ -1.22
CSDE1-213ENST00000530784 SLC28A3Q9HAS3 691 aa7.44□□□□□ -1.22
CSDE1-213ENST00000530784 ADD3Q9UEY8 706 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms