RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 HDDC3Q8N4P3 179 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PNPLA1Q8N8W4 532 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 TMIEQ8NEW7 156 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 OR13C4Q8NGS5 318 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PPP1R16AQ96I34 528 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 DNAJC1Q96KC8 554 aaKnown RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 FCRL3Q96P31 734 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 EBNA1BP2Q99848 306 aaKnown RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 FRMD8Q9BZ67 464 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 TXLNGYQ9BZA5 131 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 GPR63Q9BZJ6 419 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PLAC1Q9HBJ0 212 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 ARNT2Q9HBZ2 717 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 CD248Q9HCU0 757 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 ARGLU1Q9NWB6 273 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 PHTF1Q9UMS5 762 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 OR51F1A6NGY5 319 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 NEMP1O14524 444 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 DCXO43602 365 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 LDB2O43679 373 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PI15O43692 258 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 DNTTP04053 509 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 TUBBP07437 444 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 ADRB3P13945 408 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 GABRG2P18507 467 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PGAM1P18669 254 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 DRD3P35462 400 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 HSD17B3P37058 310 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 NPY2RP49146 381 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 GPX6P59796 221 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 SIGLEC14Q08ET2 396 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 MTAPQ13126 283 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 CRYMQ14894 314 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 SLMAPQ14BN4 828 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 E2F5Q15329 346 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PCID2Q5JVF3 399 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 BEND6Q5SZJ8 279 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 ESRP1Q6NXG1 681 aaKnown RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 TRMT10BQ6PF06 316 aaKnown RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 RFLNAQ6ZTI6 216 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 ERN2Q76MJ5 926 aaKnown RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 EIF1ADQ8N9N8 165 aaKnown RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 OR2W6PQ8NHA6 318 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 CAVIN3Q969G5 261 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 PBXIP1Q96AQ6 731 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 EID2BQ96D98 161 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 SIPA1Q96FS4 1042 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 LRIG1Q96JA1 1093 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 MRGPRX1Q96LB2 322 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 OMDQ99983 421 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 TPSD1Q9BZJ3 242 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 FOXP3Q9BZS1 431 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 EPB41L4BQ9H329 900 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 SUDS3Q9H7L9 328 aaPredicted RBP10.68□□□□□ -0.7
SOX6-213ENST00000530378 LRRC4CQ9HCJ2 640 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 FBXL12Q9NXK8 326 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 CD84Q9UIB8 345 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 SOX13Q9UN79 622 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 COQ6Q9Y2Z9 468 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 SIT1Q9Y3P8 196 aa10.68□□□□□ -0.7
SOX6-213ENST00000530378 ZNF106Q9H2Y7 1883 aaKnown RBP10.67□□□□□ -0.7
SOX6-213ENST00000530378 TSPAN11A1L157 253 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 HEATR9A2RTY3 570 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 FAM47DPA6NHR8 397 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 EIF3HO15372 352 aaKnown RBP eCLIP10.67□□□□□ -0.7
SOX6-213ENST00000530378 GPR39O43194 453 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 ADH1BP00325 375 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 ALADP13716 330 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 ARSDP51689 593 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 NEK3P51956 506 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 RPL26P61254 145 aaKnown RBP10.67□□□□□ -0.7
SOX6-213ENST00000530378 CNGA3Q16281 694 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 PIP5KL1Q5T9C9 394 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 AGBL4Q5VU57 503 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 FAM46CQ5VWP2 391 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 ALS2CLQ60I27 953 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 CRTC1Q6UUV9 634 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 TTC30BQ8N4P2 665 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 TSTD1Q8NFU3 115 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 OR4K2Q8NGD2 314 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 EDAQ92838 391 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 OSBPL6Q9BZF3 934 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 PABPC3Q9H361 631 aaKnown RBP10.67□□□□□ -0.7
SOX6-213ENST00000530378 ARFGAP3Q9NP61 516 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 PPANQ9NQ55 473 aaKnown RBP10.67□□□□□ -0.7
SOX6-213ENST00000530378 DKK3Q9UBP4 350 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 RPL26L1Q9UNX3 145 aaKnown RBP10.67□□□□□ -0.7
SOX6-213ENST00000530378 WDFY4Q6ZS81 3184 aa10.67□□□□□ -0.7
SOX6-213ENST00000530378 SMIM23A6NLE4 172 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 RIPK2O43353 540 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 SHBGP04278 402 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 C1SP09871 688 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 PRSS56P0CW18 603 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 ERVK-10P10266 1014 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 ACADMP11310 421 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 ADRA1DP25100 572 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 VIPR1P32241 457 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 MMP12P39900 470 aa10.66□□□□□ -0.7
SOX6-213ENST00000530378 ZNF140P52738 457 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms