RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TOR1BO14657 336 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 YKT6O15498 198 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 RECQL5O94762 991 aaPredicted RBP12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 HEXIM1O94992 359 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 TRBC1P01850 177 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 CEACAM1P13688 526 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 CTPS1P17812 591 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 GM2AP17900 193 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 LHCGRP22888 699 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 RBL1P28749 1068 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 CD68P34810 354 aaPredicted RBP12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 HNF1BP35680 557 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 IGFALSP35858 605 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 EPHB1P54762 984 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 EIF3EP60228 445 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 YPEL5P62699 121 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 PTPRRQ15256 657 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 IRF4Q15306 451 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 CNGA3Q16281 694 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 PPM1JQ5JR12 505 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 USP45Q70EL2 814 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 ERMP1Q7Z2K6 904 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 ZNF567Q8N184 647 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 DEFB124Q8NES8 71 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 PDLIM2Q96JY6 352 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 COQ10AQ96MF6 247 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 ALS2CR12Q96Q35 445 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 RBM15Q96T37 977 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 SLC32A1Q9H598 525 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 C10orf88Q9H8K7 445 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 GOLGA6L9A6NEM1 432 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 PSMD11O00231 422 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 GIPC1O14908 333 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 FLRT2O43155 660 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 ALPIP09923 528 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 RBP3P10745 1247 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 IL9RQ01113 521 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 BNIP3Q12983 259 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 KLF1Q13351 362 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 PDE1CQ14123 709 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 FZD2Q14332 565 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 ACOX1Q15067 660 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 SLC14A2Q15849 920 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 CRTC1Q6UUV9 634 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 KDM7AQ6ZMT4 941 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 PID1Q7Z2X4 250 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 HSD11B1LQ7Z5J1 315 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 TSPAN33Q86UF1 283 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 NAXDQ8IW45 347 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 TTC13Q8NBP0 860 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 LPCAT1Q8NF37 534 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 SPATA22Q8NHS9 363 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 SETD7Q8WTS6 366 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 IFT43Q96FT9 208 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 CAMK1GQ96NX5 476 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 SMIM14Q96QK8 99 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 FAM118BQ9BPY3 351 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 ADGRE3Q9BY15 652 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 KLHL8Q9P2G9 620 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 TRHDEQ9UKU6 1024 aa12.7□□□□□ -0.38
CCDC90B-216ENST00000529856 CNOT1A5YKK6 2376 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 CAPN8A6NHC0 703 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 ANKRD66B4E2M5 251 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 CBFA2T3O75081 653 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 MT-CYBP00156 380 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 PTMAP06454 111 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 ITGAVP06756 1048 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 NFKB1P19838 968 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 PTSQ03393 145 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 CDK18Q07002 472 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 MTM1Q13496 603 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 PTK2BQ14289 1009 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 INPP5AQ14642 412 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 QPCTQ16769 361 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 TPRG1LQ5T0D9 272 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 DENND2CQ68D51 928 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 PSAPL1Q6NUJ1 521 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 DARS2Q6PI48 645 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 GATAD2AQ86YP4 633 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 CDKL3Q8IVW4 592 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 PLA2G15Q8NCC3 412 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 TRIM58Q8NG06 486 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 RHBDD1Q8TEB9 315 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 FCRL5Q96RD9 977 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 APOOQ9BUR5 198 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 MLPHQ9BV36 600 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 USP29Q9HBJ7 922 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 KCTD5Q9NXV2 234 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 FAM153AQ9UHL3 310 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms