RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PLEKHO1Q53GL0 409 aaPredicted RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 NCAPH2Q6IBW4 605 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 GSTA5Q7RTV2 222 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 SRBD1Q8N5C6 995 aaKnown RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 HORMAD2Q8N7B1 307 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 KDM1BQ8NB78 822 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 ENGASEQ8NFI3 743 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 MIB2Q96AX9 1013 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 PABPC5Q96DU9 382 aaKnown RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 MMABQ96EY8 250 aaPredicted RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 URB1-AS1Q96HZ7 61 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 ZNF333Q96JL9 665 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 NTPCRQ9BSD7 190 aaKnown RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 SMARCAD1Q9H4L7 1026 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 DLGAP2Q9P1A6 1054 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 MYO6Q9UM54 1294 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 TMEM5Q9Y2B1 443 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 CARD8Q9Y2G2 431 aa4.74□□□□□ -1.65
C11orf88-204ENST00000529661 LSM4Q9Y4Z0 139 aaKnown RBP4.74□□□□□ -1.65
C11orf88-204ENST00000529661 FAM237AA0A1B0GTK4 181 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 A0A1B0GVT2 93 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 BECN2A8MW95 431 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 A8MZ25 164 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 STMND1H3BQB6 276 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 SCAMP1O15126 338 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 HNRNPCL1O60812 293 aaKnown RBP4.73□□□□□ -1.65
C11orf88-204ENST00000529661 PCNAP12004 261 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 ARSBP15848 533 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 CHRNB2P17787 502 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 RASSF2P50749 326 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 SELENOVP59797 346 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 IRX6P78412 446 aaPredicted RBP4.73□□□□□ -1.65
C11orf88-204ENST00000529661 TRAF1Q13077 416 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 ZNF585BQ52M93 769 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 DCAF12L2Q5VW00 463 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 JADE1Q6IE81 842 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 TSSK4Q6SA08 328 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 CHST9Q7L1S5 443 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.73□□□□□ -1.65
C11orf88-204ENST00000529661 C1orf131Q8NDD1 294 aaKnown RBP4.73□□□□□ -1.65
C11orf88-204ENST00000529661 RNF183Q96D59 192 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 FEM1CQ96JP0 617 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 YME1L1Q96TA2 773 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 MVB12BQ9H7P6 319 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 CATSPERBQ9H7T0 1116 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 PLAC1Q9HBJ0 212 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 SLC6A13Q9NSD5 602 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 PLK2Q9NYY3 685 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 SUCLA2Q9P2R7 463 aaPredicted RBP4.73□□□□□ -1.65
C11orf88-204ENST00000529661 CTNNAL1Q9UBT7 734 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 CNOT8Q9UFF9 292 aaKnown RBP4.73□□□□□ -1.65
C11orf88-204ENST00000529661 PCDHGB4Q9UN71 923 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 PCDHA7Q9UN72 937 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 FAM96BQ9Y3D0 163 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 SNX8Q9Y5X2 465 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 PTGDR2Q9Y5Y4 395 aa4.73□□□□□ -1.65
C11orf88-204ENST00000529661 SNAP23O00161 211 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 ERAL1O75616 437 aaKnown RBP4.72□□□□□ -1.65
C11orf88-204ENST00000529661 BEST1O76090 585 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 IPO7O95373 1038 aaKnown RBP4.72□□□□□ -1.65
C11orf88-204ENST00000529661 STARD3NLO95772 234 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 ADRB2P07550 413 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 MYZAPP0CAP1 466 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 NR2F1P10589 423 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 ENO3P13929 434 aaPredicted RBP4.72□□□□□ -1.65
C11orf88-204ENST00000529661 ITGAXP20702 1163 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 AGAP20933 346 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 SHMT1P34896 483 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 AVPR1AP37288 418 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 CDH8P55286 799 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 ROR2Q01974 943 aaKnown RBP4.72□□□□□ -1.65
C11orf88-204ENST00000529661 GRIK3Q13003 919 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 BECN1Q14457 450 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 RAB41Q5JT25 222 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 MFSD4BQ5TF39 518 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 OTUD1Q5VV17 481 aaPredicted RBP4.72□□□□□ -1.65
C11orf88-204ENST00000529661 TMEM154Q6P9G4 183 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 CRELD2Q6UXH1 353 aaPredicted RBP4.72□□□□□ -1.65
C11orf88-204ENST00000529661 TRILQ7L0X0 811 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 KRT74Q7RTS7 529 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 TICAM1Q8IUC6 712 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 RBFAQ8N0V3 343 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 PRR26Q8N8Z3 221 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 SGCDQ92629 289 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 CALML4Q96GE6 196 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 PGAM5Q96HS1 289 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 CDT1Q9H211 546 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 PDZD7Q9H5P4 517 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 SH2D4AQ9H788 454 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 KIF9Q9HAQ2 790 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 NDRG3Q9UGV2 375 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 FZD10Q9ULW2 581 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 MTMR6Q9Y217 621 aa4.72□□□□□ -1.65
C11orf88-204ENST00000529661 A0A0U1RQF3 1178 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 A0A1W2PQ09 198 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 TYW5A2RUC4 315 aaKnown RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 OR6C75A6NL08 312 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 HSPB2A8KAH6 182 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 BTBD18B2RXH4 712 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 B4DLN1 442 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms