RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FAF2Q96CS3 445 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SIPA1Q96FS4 1042 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 HMCESQ96FZ2 354 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 CELF6Q96J87 481 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 PDLIM2Q96JY6 352 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZC3H10Q96K80 434 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 MOGAT1Q96PD6 335 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 RNF157Q96PX1 679 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 RUFY1Q96T51 708 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF670Q9BS34 389 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 TPSD1Q9BZJ3 242 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SLC6A17Q9H1V8 727 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 GOLPH3Q9H4A6 298 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ETNK2Q9NVF9 386 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 FAM86C1Q9NVL1 165 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 TUBA8Q9NY65 449 aaPredicted RBP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 SPO11Q9Y5K1 396 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 ACTL7AQ9Y615 435 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 VPS13AQ96RL7 3174 aa6.35□□□□□ -1.39
ATPAF1-209ENST00000529214 A0A1W2PP55 124 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 J3KR12 359 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 PSTPIP1O43586 416 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 KRT86O43790 486 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 SPOPO43791 374 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 CEP104O60308 925 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 OPA1O60313 960 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 RNASEH1O60930 286 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 RPP40O75818 363 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 IGLV3-19P01714 112 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 EPB42P16452 691 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 S100A5P33763 92 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 GJC1P36383 396 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 CCNFP41002 786 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 IDH3AP50213 366 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 SERPINH1P50454 418 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 CLCN2P51788 898 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 RPS26P62854 115 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 AP2B1P63010 937 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 SH3BP2P78314 561 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 ELAVL3Q14576 367 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 STAT4Q14765 748 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 SUZ12Q15022 739 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 PAFAH1B3Q15102 231 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 TAZQ16635 292 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 IFI16Q16666 785 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 CARD16Q5EG05 197 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 SH2D4BQ5SQS7 431 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 BTN2A1Q7KYR7 527 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 TMEM151BQ8IW70 566 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 RCOR2Q8IZ40 523 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 STK40Q8N2I9 435 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 PCDH20Q8N6Y1 951 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 PQLC3Q8N755 202 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 LRRC57Q8N9N7 239 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 SUMF1Q8NBK3 374 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 NETO2Q8NC67 525 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 OR2A12Q8NGT7 310 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 CASKIN2Q8WXE0 1202 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 GATAD2BQ8WXI9 593 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 CALN1Q9BXU9 219 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 EPC1Q9H2F5 836 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 PDFQ9HBH1 243 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 KLHL11Q9NVR0 708 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 WSB2Q9NYS7 404 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 USP36Q9P275 1121 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 TRIM10Q9UDY6 481 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 SCML1Q9UN30 329 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 INVSQ9Y283 1065 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 MFHAS1Q9Y4C4 1052 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 PCDHA3Q9Y5H8 950 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 MAGED1Q9Y5V3 778 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 MRFAP1Q9Y605 127 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 DMDP11532 3685 aa6.34□□□□□ -1.39
ATPAF1-209ENST00000529214 IGHV1OR15-9A0A0B4J2B8 117 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 MACROD2A1Z1Q3 448 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 LRRD1A4D1F6 860 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 GRID2IPA4D2P6 1211 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 DFFAO00273 331 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 ALOX15BO15296 676 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 PIP5K1CO60331 668 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 BRINP1O60477 761 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 MAFKO60675 156 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 PRAMEF11O60813 436 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 LILRA1O75019 489 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 PALMO75781 387 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 STAMBPO95630 424 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 ADH1BP00325 375 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 LMNAP02545 664 aaKnown RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 DNTTP04053 509 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 ACADMP11310 421 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 RAC2P15153 192 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CD9P21926 228 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SERPINB3P29508 390 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 OXTRP30559 389 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CHRNA3P32297 505 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC8A1P32418 973 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SERPINB6P35237 376 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 RANBP1P43487 201 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 PEX5P50542 639 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms