RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CYBAP13498 195 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 PKMP14618 531 aaKnown RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 NR4A2P43354 598 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 VAMP2P63027 116 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 UBE3AQ05086 875 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 ALKBH1Q13686 389 aaKnown RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 LAMB3Q13751 1172 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 ANKRD1Q15327 319 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 CCL14Q16627 93 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 SHROOM1Q2M3G4 852 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 PLK5Q496M5 336 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 GXYLT1Q4G148 440 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 SBK1Q52WX2 424 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 C10orf25Q5T742 122 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 ANKRD45Q5TZF3 282 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 ASPHD1Q5U4P2 390 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 C12orf60Q5U649 245 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 ZSCAN25Q6NSZ9 544 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 LVRNQ6Q4G3 990 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 SHC4Q6S5L8 630 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 FAM57BQ71RH2 274 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 TICAM2Q86XR7 235 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 MIGA1Q8NAN2 632 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 C2CD4CQ8TF44 421 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 MOV10L1Q9BXT6 1211 aaKnown RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 SPATC1LQ9H0A9 340 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 RPAP3Q9H6T3 665 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 RMI1Q9H9A7 625 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 THAP1Q9NVV9 213 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 PAG1Q9NWQ8 432 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 MCM9Q9NXL9 1143 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 RRN3Q9NYV6 651 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 KLQ9UEF7 1012 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 AGO2Q9UKV8 859 aaKnown RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 EXOC6BQ9Y2D4 811 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 SZT2Q5T011 3432 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 CDK5RAP2Q96SN8 1893 aa5.09□□□□□ -1.6
CSDE1-212ENST00000529046 ROBO3Q96MS0 1386 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 KIR2DS5A0A0G2JLQ3 304 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 FAM90A7PA6NKC0 464 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 FAM90A22PA8MWA6 464 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 FAM90A12PA8MX19 464 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 FAM90A23PA8MXZ1 464 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 PROB1E7EW31 1015 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 KIR2DS3K7RE56 304 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 SOCS2O14508 198 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 ADAM10O14672 748 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 HOXC11O43248 304 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 FGBP02675 491 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 ZFYP08048 801 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 LYL1P12980 280 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 CCND3P30281 292 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 GJC1P36383 396 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 RPS6KA3P51812 740 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 OAZ1P54368 228 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 LRRC26Q2I0M4 334 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 ISM2Q6H9L7 571 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 MRPL10Q7Z7H8 261 aaKnown RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 TMTC1Q8IUR5 882 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 C16orf52Q8NHV5 167 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 MSI2Q96DH6 328 aaKnown RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 ADAD1Q96M93 576 aaKnown RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 CLPBQ9H078 707 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 VCPKMTQ9H867 229 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 IL1RAPL2Q9NP60 686 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 SPAG4Q9NPE6 437 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 NYAP2Q9P242 653 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 HDAC6Q9UBN7 1215 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 GTF2A1LQ9UNN4 478 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 CEP290O15078 2479 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 ZNF236Q9UL36 1845 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 DDX60LQ5H9U9 1706 aaKnown RBP5.08□□□□□ -1.6
CSDE1-212ENST00000529046 DNAH12Q6ZR08 3092 aa5.08□□□□□ -1.6
CSDE1-212ENST00000529046 CCDC189A1A4V9 331 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 VWA5AO00534 786 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 NEURL1O76050 574 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 LCKP06239 509 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 RXRAP19793 462 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 HOXD9P28356 352 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-212ENST00000529046 TYK2P29597 1187 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 MAPK7Q13164 816 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 STIM1Q13586 685 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 MIDNQ504T8 468 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 WDR45BQ5MNZ6 344 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 C10orf76Q5T2E6 689 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 AADACL2Q6P093 401 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 CTR9Q6PD62 1173 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 SLC30A9Q6PML9 568 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 KLBQ86Z14 1044 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 LSM14AQ8ND56 463 aaKnown RBP5.07□□□□□ -1.6
CSDE1-212ENST00000529046 TRPV1Q8NER1 839 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 SDR42E1Q8WUS8 393 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 KAT2AQ92830 837 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 FRG2BQ96QU4 278 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 PHF7Q9BWX1 381 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-212ENST00000529046 LRRCC1Q9C099 1032 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.07□□□□□ -1.6
CSDE1-212ENST00000529046 MTMR10Q9NXD2 777 aa5.07□□□□□ -1.6
CSDE1-212ENST00000529046 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms