RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TNFRSF10CO14798 259 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 RECQL5O94762 991 aaPredicted RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 CCNB1P14635 433 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 ITIH2P19823 946 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 IGFALSP35858 605 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 RGRP47804 291 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 HK3P52790 923 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 RPL26P61254 145 aaKnown RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 EIF2B5Q13144 721 aaKnown RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 TBX2Q13207 712 aaPredicted RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 PEX6Q13608 980 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 ARHGEF7Q14155 803 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 NFATC4Q14934 902 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 ACOX1Q15067 660 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 IRF4Q15306 451 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 NR0B2Q15466 257 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 SPA17Q15506 151 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 PRRT3Q5FWE3 981 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 LRRC73Q5JTD7 316 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 TXNRD3NBQ6F5E7 133 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 ENPP7Q6UWV6 458 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 USP45Q70EL2 814 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 NLRP8Q86W28 1048 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 GKN2Q86XP6 184 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 RHOT1Q8IXI2 618 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 PHACTR4Q8IZ21 702 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 OR6C4Q8NGE1 309 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 PCDH19Q8TAB3 1148 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 PDCD6IPQ8WUM4 868 aaKnown RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 MAML1Q92585 1016 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 FAF2Q96CS3 445 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 APOLD1Q96LR9 279 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 RNF157Q96PX1 679 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 NOD2Q9HC29 1040 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 RBM22Q9NW64 420 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHD7-208ENST00000528280 APOBEC3BQ9UH17 382 aaKnown RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 RPL26L1Q9UNX3 145 aaKnown RBP9.64□□□□□ -0.87
CHD7-208ENST00000528280 CLCA2Q9UQC9 943 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 PCDHGC4Q9Y5F7 938 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 APC2O95996 2303 aa9.64□□□□□ -0.87
CHD7-208ENST00000528280 CELSR3Q9NYQ7 3312 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 EME2A4GXA9 379 aaPredicted RBP9.63□□□□□ -0.87
CHD7-208ENST00000528280 MUSKO15146 869 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 PGLSO95336 258 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 CPP00450 1065 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 PYGLP06737 847 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 CD48P09326 243 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 GIMD1P0DJR0 217 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 TEAD1P28347 426 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 VIPR1P32241 457 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 TRIM23P36406 574 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 MAGEA1P43355 309 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 NR2C2P49116 596 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 EPHB1P54762 984 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 KIAA1024LP59773 190 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 SRP54P61011 504 aaKnown RBP9.63□□□□□ -0.87
CHD7-208ENST00000528280 TARDBPQ13148 414 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHD7-208ENST00000528280 CAMK2BQ13554 666 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 PDK1Q15118 436 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 ATP13A4Q4VNC1 1196 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 HES3Q5TGS1 186 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 NCBP2-AS2Q69YL0 99 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 PNCKQ6P2M8 343 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 ZSWIM9Q86XI8 627 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 TP53INP2Q8IXH6 220 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 LSMEM2Q8N112 164 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 CBARPQ8N350 705 aaPredicted RBP9.63□□□□□ -0.87
CHD7-208ENST00000528280 CCNYQ8ND76 341 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 HNRNPLLQ8WVV9 542 aaKnown RBP9.63□□□□□ -0.87
CHD7-208ENST00000528280 NAT6Q93015 286 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 HDAC11Q96DB2 347 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 NXPE2Q96DL1 559 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 WDR92Q96MX6 357 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 SEMA3CQ99985 751 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 PACSIN1Q9BY11 444 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 NT5MQ9NPB1 228 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 COQ6Q9Y2Z9 468 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 RAI2Q9Y5P3 530 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 DGKBQ9Y6T7 804 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 CFAP46Q8IYW2 2715 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 KNTC1P50748 2209 aa9.63□□□□□ -0.87
CHD7-208ENST00000528280 LRRD1A4D1F6 860 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 GOLGA6L3A6NEY3 463 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 TMX2-CTNND1H3BSU7 103 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 YY2O15391 372 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 ZW10O43264 779 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 OPA1O60313 960 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 IPO7O95373 1038 aaKnown RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 MT-CO3P00414 261 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 PCCBP05166 539 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 TSHRP16473 764 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 ZNF30P17039 623 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 CYLC1P35663 651 aaPredicted RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 GJC1P36383 396 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 NOP2P46087 812 aaKnown RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 HADHBP55084 474 aaKnown RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 TAS2R40P59535 323 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms