RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 SNX1Q13596 522 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 PPM1JQ5JR12 505 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 SYCP2LQ5T4T6 812 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 AGBL4Q5VU57 503 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 LYSMD4Q5XG99 296 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 NCEH1Q6PIU2 408 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 PID1Q7Z2X4 250 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 SLC41A1Q8IVJ1 513 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 TEX26Q8N6G2 289 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 ATG4AQ8WYN0 398 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 FATE1Q969F0 183 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 PBKQ96KB5 322 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 ZNF641Q96N77 438 aaPredicted RBP11.09□□□□□ -0.63
CCDC84-205ENST00000528088 NAPGQ99747 312 aaPredicted RBP11.09□□□□□ -0.63
CCDC84-205ENST00000528088 CPEB1Q9BZB8 566 aaKnown RBP11.09□□□□□ -0.63
CCDC84-205ENST00000528088 NOD2Q9HC29 1040 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
CCDC84-205ENST00000528088 C4orf47A7E2U8 309 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 CDX4O14627 284 aaPredicted RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 SOCS5O75159 536 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 ZNF189O75820 626 aaPredicted RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 CPP00450 1065 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 IGLV3-19P01714 112 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 CES1P23141 567 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 NFKBIAP25963 317 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 PTPN3P26045 913 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 LIMK1P53667 647 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 POLR2LP62875 67 aaKnown RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 POU4F2Q12837 409 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 KLF1Q13351 362 aaPredicted RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 PCSK7Q16549 785 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 TEX44Q53QW1 395 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 RALGPS1Q5JS13 557 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 WDR45BQ5MNZ6 344 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 PIP5KL1Q5T9C9 394 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 ARMC12Q5T9G4 340 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 ITPRIPL1Q6GPH6 555 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 ERAP2Q6P179 960 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 BRAT1Q6PJG6 821 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 OR2T34Q8NGX1 318 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 FBF1Q8TES7 1133 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 C1orf54Q8WWF1 131 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 ZNF419Q96HQ0 510 aaPredicted RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 OSBPL9Q96SU4 736 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 NAP1L3Q99457 506 aaPredicted RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 IL12RB2Q99665 862 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 EDEM2Q9BV94 578 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 HDAC8Q9BY41 377 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 C6orf106Q9H6K1 298 aaPredicted RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 RSPH14Q9UHP6 348 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 ZNF148Q9UQR1 794 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 R3HDM2Q9Y2K5 976 aaKnown RBP11.08□□□□□ -0.64
CCDC84-205ENST00000528088 RAI2Q9Y5P3 530 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 DOCK9Q9BZ29 2069 aa11.08□□□□□ -0.64
CCDC84-205ENST00000528088 UPK3BL1B0FP48 263 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 UPK3BL2E5RIL1 263 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 PGRMC1O00264 195 aaKnown RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 KHNYNO15037 678 aaKnown RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 PLRG1O43660 514 aaKnown RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 PRKCGP05129 697 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 NFKB1P19838 968 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 CR2P20023 1033 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 MAT2AP31153 395 aaKnown RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 ACTN2P35609 894 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 IDH3AP50213 366 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 FAM193AP78312 1265 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 TRAF2Q12933 501 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 HIF1AQ16665 826 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 TRIM61Q5EBN2 209 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 KIAA0895LQ68EN5 471 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 ARHGEF18Q6ZSZ5 1173 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 GSTA5Q7RTV2 222 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 NDUFAF2Q8N183 169 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 ZNF567Q8N184 647 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 CXorf40AQ8TE69 158 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 RAB7BQ96AH8 199 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 CAPZA3Q96KX2 299 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 WDR24Q96S15 920 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 RBM15Q96T37 977 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 VAT1Q99536 393 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 TMEM121Q9BTD3 319 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 WRAP53Q9BUR4 548 aaKnown RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 FRMD8P1Q9BZ68 369 aaPredicted RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 GLOD4Q9HC38 313 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 PREBQ9HCU5 417 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 DKK3Q9UBP4 350 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 PILRBQ9UKJ0 227 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 TRHDEQ9UKU6 1024 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 DNPEPQ9ULA0 475 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 SNX12Q9UMY4 172 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 ITM2BQ9Y287 266 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 ATP8A1Q9Y2Q0 1164 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 TNRC6BQ9UPQ9 1833 aaKnown RBP11.07□□□□□ -0.64
CCDC84-205ENST00000528088 PI4KAP42356 2102 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 LAMA1P25391 3075 aa11.07□□□□□ -0.64
CCDC84-205ENST00000528088 GOLGA6L10A0A0M3HER8 536 aa11.06□□□□□ -0.64
CCDC84-205ENST00000528088 A0A1W2PQ67 120 aa11.06□□□□□ -0.64
CCDC84-205ENST00000528088 CFAP69A5D8W1 941 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms