RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CAAP1Q9H8G2 361 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 PCDH18Q9HCL0 1135 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 PHTF1Q9UMS5 762 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 OR1A2Q9Y585 309 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 PCDHB1Q9Y5F3 818 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 PCDHGA8Q9Y5G5 932 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 A0A087X0T9 212 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 PSMD11O00231 422 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 PCCBP05166 539 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 FAM228BP0C875 321 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 CES1P23141 567 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 HNRNPH3P31942 346 aaKnown RBP14.24□□□□□ -0.13
CAPN1-212ENST00000527887 PCBP4P57723 403 aaKnown RBP14.24□□□□□ -0.13
CAPN1-212ENST00000527887 GSDMDP57764 484 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 GABREP78334 506 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 KRT81Q14533 505 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
CAPN1-212ENST00000527887 CCDC122Q5T0U0 273 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 MAP7D3Q8IWC1 876 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 TEX26Q8N6G2 289 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 CPLX3Q8WVH0 158 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 THSD1Q9NS62 852 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 ETNK2Q9NVF9 386 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 UVRAGQ9P2Y5 699 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 AMACRQ9UHK6 382 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 PPIL1Q9Y3C6 166 aa14.24□□□□□ -0.13
CAPN1-212ENST00000527887 ADAMTS20P59510 1910 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 GYPCP04921 128 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 PRKCGP05129 697 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 CYP2A6P11509 494 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-212ENST00000527887 PNLIPP16233 465 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 IL4RP24394 825 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 TEAD1P28347 426 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 VIPR1P32241 457 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 MMP13P45452 471 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 PDK2Q15119 407 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 TIGD7Q6NT04 549 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-212ENST00000527887 PNCKQ6P2M8 343 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 OGFOD3Q6PK18 319 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 TP53INP2Q8IXH6 220 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 CBARPQ8N350 705 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-212ENST00000527887 LSM14AQ8ND56 463 aaKnown RBP14.23□□□□□ -0.13
CAPN1-212ENST00000527887 FATE1Q969F0 183 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 FUBP1Q96AE4 644 aaKnown RBP14.23□□□□□ -0.13
CAPN1-212ENST00000527887 SCRN2Q96FV2 425 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 HIC2Q96JB3 615 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 COQ10AQ96MF6 247 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 CCDC3Q9BQI4 270 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 WDR26Q9H7D7 661 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 NOD2Q9HC29 1040 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 GULP1Q9UBP9 304 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 B4GALT6Q9UBX8 382 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 GPR34Q9UPC5 381 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
CAPN1-212ENST00000527887 LOC400499M0QZD8 3231 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 SMG1Q96Q15 3661 aaKnown RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 NTN3O00634 580 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 HEXIM1O94992 359 aaKnown RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 CPP00450 1065 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 MPOP05164 745 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 H2AFZP0C0S5 128 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 TCF4P15884 667 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 RBMS1P29558 406 aaKnown RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 SSR1P43307 286 aaKnown RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 UCNP55089 124 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PEX6Q13608 980 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 TRIM14Q14142 442 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 SPIDRQ14159 915 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 ACOX1Q15067 660 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 SOWAHCQ53LP3 525 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PERM1Q5SV97 790 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 ARMC12Q5T9G4 340 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 TXNRD3NBQ6F5E7 133 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 USP45Q70EL2 814 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 H2AFVQ71UI9 128 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 RD3Q7Z3Z2 195 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 VSTM4Q8IW00 320 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 RAVER1Q8IY67 606 aaKnown RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PLA2G15Q8NCC3 412 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PCDH19Q8TAB3 1148 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 ZNF564Q8TBZ8 553 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 CCDC97Q96F63 343 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 NSMCE3Q96MG7 304 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 SLC46A1Q96NT5 459 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 UBL7Q96S82 380 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 ZNF670Q9BS34 389 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 DPH1Q9BZG8 443 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PRORYQ9H606 182 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 PHPT1Q9NRX4 125 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-212ENST00000527887 APPL1Q9UKG1 709 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 DNPEPQ9ULA0 475 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 ENTPD2Q9Y5L3 495 aa14.22□□□□□ -0.13
CAPN1-212ENST00000527887 TMEM202A6NGA9 273 aa14.21□□□□□ -0.13
CAPN1-212ENST00000527887 TK2O00142 265 aa14.21□□□□□ -0.13
CAPN1-212ENST00000527887 PROSCO94903 275 aa14.21□□□□□ -0.13
CAPN1-212ENST00000527887 PGLSO95336 258 aa14.21□□□□□ -0.13
CAPN1-212ENST00000527887 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
CAPN1-212ENST00000527887 KRT7P08729 469 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms