RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 INPP4BO15327 924 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 SLC7A4O43246 635 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 HLA-DQB2P05538 268 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 NRIP1P48552 1158 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 LIMK2P53671 638 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 NRLP54845 237 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 HECTD2Q5U5R9 776 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 BNC2Q6ZN30 1099 aaPredicted RBP15.11■□□□□ 0.01
USP47-207ENST00000527733 GRASPQ7Z6J2 395 aaPredicted RBP15.11■□□□□ 0.01
USP47-207ENST00000527733 TAGAPQ8N103 731 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 SPATA6LQ8N4H0 392 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 FAM162AQ96A26 154 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 VPS51Q9UID3 782 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 SNX3O60493 162 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 NDUFS2O75306 463 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 FAM155BO75949 473 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 MLYCDO95822 493 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 NMBRP28336 390 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 CACNG1Q06432 222 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 RING1Q06587 406 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 LIPMQ5VYY2 423 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 DNAJC1Q96KC8 554 aaKnown RBP15.1■□□□□ 0.01
USP47-207ENST00000527733 CYP2S1Q96SQ9 504 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 CLDND1Q9NY35 253 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 SEC22BO75396 215 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 SNUPNO95149 360 aaKnown RBP15.1■□□□□ 0.01
USP47-207ENST00000527733 GPC1P35052 558 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 ZBTB6Q15916 424 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 GPRIN1Q7Z2K8 1008 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 TMEM130Q8N3G9 435 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 TRPC4APQ8TEL6 797 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 RABGEF1Q9UJ41 708 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 GABRDO14764 452 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 PTPN4P29074 926 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 CHRNA4P43681 627 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 PRIM2P49643 509 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 PITX1P78337 314 aaPredicted RBP15.1■□□□□ 0.01
USP47-207ENST00000527733 PAGE2BQ5JRK9 111 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 TDRPQ86YL5 185 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 OTUB1Q96FW1 271 aaPredicted RBP15.1■□□□□ 0.01
USP47-207ENST00000527733 C1orf74Q96LT6 269 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 TCF12Q99081 682 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 CCDC3Q9BQI4 270 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 TEX12Q9BXU0 123 aa15.1■□□□□ 0.01
USP47-207ENST00000527733 WNK3Q9BYP7 1800 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 HSPA1AP0DMV8 641 aaKnown RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 HSPA1BP0DMV9 641 aaKnown RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 HOXD8P13378 290 aaPredicted RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 ACVRL1P37023 503 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 PSMD8P48556 350 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 CORO7P57737 925 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 ERVK-21P61565 698 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 KIAA0930Q6ICG6 404 aaPredicted RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 IL27RAQ6UWB1 636 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 SH3GL1Q99961 368 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 CACNB4O00305 520 aaPredicted RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 TEX28O15482 410 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 RGS14O43566 566 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 CDK14O94921 469 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 PRAMEF1O95521 474 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 ITGB1P05556 798 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 NQO1P15559 274 aaKnown RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 CRHR1P34998 444 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 ECT2LQ008S8 904 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 TP53BP2Q13625 1128 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 TEAD2Q15562 447 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 CNSTQ6PJW8 725 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 TXNDC11Q6PKC3 985 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 KYQ8NBH2 561 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 AP2M1Q96CW1 435 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 KLHL32Q96NJ5 620 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 THEGQ9P2T0 379 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 MYH7BA7E2Y1 1941 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 CCL22O00626 93 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 DCXO43602 365 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 PGS1Q32NB8 556 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 FUT11Q495W5 492 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 PHIPQ8WWQ0 1821 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 SLC17A7Q9P2U7 560 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 KLQ9UEF7 1012 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 PLLPQ9Y342 182 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 J3KR12 359 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 RNASEH2AO75792 299 aaKnown RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 KELP23276 732 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 HPCAP84074 193 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 FASTKQ14296 549 aaKnown RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 CMTM8Q8IZV2 173 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 ASZ1Q8WWH4 475 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 MIEF1Q9NQG6 463 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 PHPT1Q9NRX4 125 aaPredicted RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 TMEM248Q9NWD8 314 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 LGALS13Q9UHV8 139 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 CORO1CQ9ULV4 474 aaPredicted RBP15.09■□□□□ 0.01
USP47-207ENST00000527733 ERVW-1Q9UQF0 538 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 RAP2CQ9Y3L5 183 aa15.09■□□□□ 0.01
USP47-207ENST00000527733 COCHO43405 550 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 ACSM2AQ08AH3 577 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 ACSM2BQ68CK6 577 aa15.08■□□□□ 0.01
USP47-207ENST00000527733 MBLAC2Q68D91 279 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms